Thermothelomyces thermophilus: MYCTH_2297018
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Entry
MYCTH_2297018 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MYCTH_2297018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtm03009
]
MYCTH_2297018
Ribosome biogenesis [BR:
mtm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MYCTH_2297018
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
WDR55
Beta-prop_TEP1_2nd
Utp12
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
DSE1_N
ASA1
Beta-prop_CAF1B_HIR1
Beta-prop_NOL10_N
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_Vps41
WD40_RFWD3
WDR54
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
RMC1_N
PROPPIN
Beta-prop_RIG_1st
Tricorn_2nd
WD40_like
WD_LRWD1
Beta-prop_ACSF4
DNAI3_WD
DIKK1-2-4_C-subdom1
Peptidase_C107
RelA_RIS
Motif
Other DBs
NCBI-GeneID:
11508351
NCBI-ProteinID:
XP_003659683
JGI:
2297018
UniProt:
G2Q3T5
LinkDB
All DBs
Position
1:complement(join(5445529..5448412,5448487..5448503))
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AA seq
966 aa
AA seq
DB search
MVKSYLKFEPSKSFGVVVSSNSNLVWTSRGKAGTGAGQAIVAANEEVLVWDIKKGELLSR
WRDESCKANVTAIAQSRTDPDVFAVGYEDGSIRLWDSKIATSMVSFNGHKSAITTLAFDK
TGVRLASGAKDTDIIVWDLVAEVGQYKLRGHKDQVTGLHFIEPDPIVQGEGEEEQALMAV
DTEAAEGFLLTTGKDALIKLWDLTSRHCIETHVAQTNGECWALGVTPDFSGCVTAGNDGE
MTVWALDVEALASSARKVDLSQSVNFLRPRGTLHRSSKERAAEVIFHPRRDYFAVHGVEK
SVEIWRIRNEAEVKKSLARKKRRKREKLAKEKKADGDLEMDDAEGKAEDITQAEISDVIV
QHVIVRTTGKVRSVDWAINPGNKDLQLLVGSTNNLLELYTIVGKDKLKSKSDVPDYSKAL
AIELPGHRTDIRSLAISSDDKMLASAANGSLKIWNLKTQTCVRTFECGYALCCAFLPGDK
VVIVGTKEGELQLYDVASAALLETVNAHDGHAIWSLQVHPDGKSVVTGGADKTAKFWDFK
IVQEQVLGTTRTTPKLKLVQSRILKVSDDILSLRFSPDARLLAVALLDSTVKVFFVDTLK
LYLNLYGHKLPVLSMDISYDSKLIVTSSADKNIRIWGLDFGDCHKALFGHQDSILQVVFV
PHNSDGNGHHFFSASKDRTIKYWDGDKFEQIQRIDGHHGEIWALAISHSGTALVSASHDK
SIRVWEETDEQIFLEEEREKELEELYESTLTTSLEQDPDEQDADREVAAASKQTVETLKA
GERIAEALELGMADLNTLEQWREARQANPAVAPPQRNPVLVALGNVSAEAYVLSTLQKIK
PAALHDALLVLPFSAVPMLFTFLDLFARREMNVPLTCRILFFMLKAHHKQIVASRTMRAM
LDGIRANLRRALRRQKDEMGYNIAALKVVGMQLREKSVKEYVDEKWEQENQGPISGARKR
GFIHVS
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaatcctatctcaaattcgagccctccaagtcctttggcgtcgtcgtatcaagc
aactcgaacctcgtctggacgtctcggggaaaggcgggcaccggcgctggccaggccatc
gtcgccgccaatgaggaggttctagtgtgggacatcaagaagggcgagctgctcagtcgc
tggcgggatgagagctgcaaggccaatgtgacggccatcgcccagagccggaccgatccc
gacgtgttcgccgtgggctacgaggatggtagcatacgtctctgggacagcaagattgcc
acctcgatggtgagcttcaatgggcataagtcggccatcaccaccctcgccttcgacaag
accggcgtgcgcctcgcgagcggcgccaaggacaccgatatcatcgtgtgggatctcgtc
gccgaggtgggccagtacaagctgcgtggacacaaggatcaagtcaccgggctgcacttt
attgagccggacccgatagtgcagggagagggcgaggaggagcaggctctgatggccgtc
gacacagaggcggcggaagggtttctgctgaccaccggaaaggatgcgctgatcaagctc
tgggacctgacttctcgccactgcatcgagacgcatgttgcgcagaccaacggggagtgc
tgggccctgggtgtgaccccagacttcagcgggtgtgtcacggccgggaacgacggtgag
atgacggtgtgggcgctggacgtggaggcgctggcttcctcggcgcgaaaggtcgacctc
tcgcaatctgtcaacttcctccgccccaggggcacgttacaccggagcagcaaggagagg
gcggccgaggtgatattccacccgcggcgcgactactttgcggtgcacggggtggaaaaa
tcggttgagatctggaggatacgaaacgaggcggaggtcaagaagagcctcgccaggaaa
aagaggaggaaaagggagaaactggcaaaggagaaaaaggcggacggagatctggagatg
gacgatgccgagggcaaggccgaggatatcacccaggccgagatctccgacgtcattgtc
cagcatgtcattgtccggacgacgggcaaggtcaggtcggtcgactgggccatcaacccg
gggaataaggatctgcaactgctggttgggtccacgaacaacctgctcgagctctacacg
attgtcgggaaagacaagctcaagtcaaagagcgatgtgccggattacagcaaggctctg
gccattgagctcccaggccaccggacagacatccggtccctggcgatcagctctgacgat
aagatgctggcctcggccgcaaatggctcgctaaagatctggaacctcaagacgcagacc
tgcgtcaggacgttcgagtgcggctatgcgctctgctgcgctttcctcccgggcgacaag
gtggtgatcgtgggtaccaaggagggagagctccagctctacgacgttgcctcggcggca
ttgctcgagacggtcaacgcgcacgatggtcacgccatctggtcgctgcaagtccacccg
gacgggaaatcggtggtgacaggaggcgcggataagacggccaagttctgggacttcaag
atcgtccaggagcaggtcctcggcacgacaagaacaacgcccaaactcaagctggtccag
tcgaggatcctcaaggtatcggacgacattctcagcctgcggttctcccccgacgcccgg
ctgctggccgtcgctctcctcgacagtacggtcaaggtgttcttcgtcgacaccctgaag
ctgtacctcaacctctacggccacaagctgccggtgctcagcatggatatttcgtacgac
agcaagctcatcgtgacgagttcggccgacaaaaacatccggatctggggtctcgatttc
ggcgactgccacaaggcgctcttcggccaccaggacagcatcctgcaggtcgtcttcgtc
ccgcacaactcggacggcaacggccaccacttcttcagcgccagcaaggaccgcaccatc
aagtactgggacggcgacaagttcgagcagatccagcgcatcgacggtcaccacggcgag
atctgggcgctcgccatcagccacagcggcaccgccctggtctccgccagccacgacaag
agcatccgcgtctgggaggagacggacgagcagatcttcctcgaggaagagcgcgagaag
gagctcgaagagctctacgagtccaccctcaccacctccctcgagcaggacccggacgag
caggacgcggaccgggaggtggcggcggcgtcgaagcagacggtcgagacgctcaaggcg
ggcgagcgcatcgccgaggcgctcgagctcggcatggccgacctcaacacgctcgagcag
tggcgcgaggcgcgccaagccaacccggccgtcgcgccgccgcagcgcaaccccgtcctc
gtcgcgctcggcaacgtctcggccgaggcgtacgtgctctcgacgctgcagaagatcaag
ccggccgcgctgcacgacgccctcctggtcctccccttctcggccgtcccgatgctcttc
accttcctcgacctcttcgcccgccgcgagatgaacgtcccgctcacctgccgcatcctc
ttcttcatgctcaaggcccaccacaagcagatcgtcgccagccggaccatgcgcgccatg
ctcgacggcatccgcgccaacctgcgccgcgccctccgcaggcagaaggacgagatgggc
tacaacatcgccgccctcaaggtcgtcggcatgcagctgcgcgagaagagcgtcaaggag
tacgtggacgagaagtgggagcaggagaaccagggtcccatcagcggggcaagaaagagg
gggttcatccatgtttcgtga
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