Thermothelomyces thermophilus: MYCTH_2297570
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Entry
MYCTH_2297570 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCTH_2297570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_2297570
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MYCTH_2297570
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
11505551
NCBI-ProteinID:
XP_003659954
JGI:
2297570
UniProt:
G2Q6D7
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All DBs
Position
1:6550636..6551778
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AA seq
380 aa
AA seq
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MTAPTVKLPAPLFAKLSPHPFLLRNLTSAAGPDRPPARTNGRSTQETRPLLVKSSSLSHA
HGSALVRLGDTTVLCGVRGELLPVDRIPGFRPVPAEERRRAAGDDRDRDRDGDGDGSGVG
RGELKDYDLLVPNIELATGSAPQFLPGAPPTVLAQTLSTRLYSLLHSTGLVGVRDLRVWS
TPGSGPQQQKGEDVRMGGAEEEGGGREDGDVEKEEEEEEEEEDRVVAYWVLYIDLLFVSF
DGNPFDAAWAAVVAALRDTSLPVARWDPEREMVVCSRTEKRKLNVTGLPVACTAAVFEEK
DLGEVGTGTAEGRHWLLLDPDRLEESLCRETITMVVDCSDGETRIKSIEKQGGTTIGREL
IRGFAGIAGKRWEEVKDAMN
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgacagccccgacggtaaaactccccgccccgctcttcgccaagctctcgccgcacccc
ttcctcctgcgcaacctcacctccgccgccggcccggaccgcccgcccgcccgcaccaac
ggccgcagcacccaggagacccgcccgctgctcgtaaagtcctcgtcgctctcccacgcc
cacggcagcgcgctcgtccgcctcggcgacaccaccgtcctgtgcggcgtccgcggcgag
ctgctgcccgtcgaccgcatccccgggttcaggcccgtccccgcggaggagaggaggagg
gcggcgggcgacgaccgcgaccgcgaccgcgacggggacggcgacggcagtggtgtgggg
aggggcgagctcaaggactacgacctgctcgtgcctaacatcgagctggccacgggctcg
gcgccccagttcctgcccggcgccccgccgaccgtcctcgcgcagaccttgtccacccgg
ctgtactcgctgctgcactcgaccggcctggtcggcgtgagggatctgagggtctggtct
acccccgggtcagggccgcagcagcagaagggagaggatgtcaggatgggcggggcggag
gaagaggggggggggcgagaagacggagacgtggagaaggaagaggaggaggaggaggag
gaggaggacagggtggttgcctactgggtgctgtacatcgaccttctcttcgtgtccttt
gacgggaacccgttcgacgcggcttgggcggcggtcgtggcggcgttgagggataccagt
ctgccggtcgcgaggtgggatccggagcgggagatggtggtgtgctcgcgcaccgagaag
aggaagctcaacgtgaccggtctgccggtggcgtgcaccgccgccgttttcgaggagaag
gacttgggcgaggtcgggaccggcactgccgaaggcaggcattggttgctcctggatccg
gatcggctggaggagagcctatgccgcgaaacgatcacaatggtggtggactgcagcgat
ggggagacgaggatcaagagcatcgagaagcaaggcggcacaacaatcgggagggagctg
atacgcggctttgcggggattgcgggaaagagatgggaggaggtcaaggacgccatgaac
tga
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