Thermothelomyces thermophilus: MYCTH_2298741
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Entry
MYCTH_2298741 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCTH_2298741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_2298741
03041 Spliceosome [BR:
mtm03041
]
MYCTH_2298741
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
MYCTH_2298741
Spliceosome [BR:
mtm03041
]
Complex B
Other components
Prp19-related factors
MYCTH_2298741
Complex C
MYCTH_2298741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
TPR_8
TPR_15
RPN7
ARM_TT21
NRDE-2
Motif
Other DBs
NCBI-GeneID:
11508829
NCBI-ProteinID:
XP_003660429
JGI:
2298741
UniProt:
G2Q317
LinkDB
All DBs
Position
1:join(8490740..8490787,8490846..8491016,8491084..8493336)
Genome browser
AA seq
823 aa
AA seq
DB search
MASTTTSGRQPDLALVSEDDFAYEQDIQRNPGSTKPWLAYIEYKLQHGTEREQAFVMERA
CVQLPRSYKLWKMYLRFRVKHVSKLNAAIFAAEYQKVNALFERALILLNKMPRIWEMYLQ
FLMQQPLVTATRRAFDRALRALPITQHNRIWALYKPFANSAEGMTAVKIWRRYMQVHPED
AEDFIELLVHTGLYTEAVKKYIEILNNPRFQSKNAKGHYELWSEMVDLLVEHAVDIDTGH
ESEIDVEAIIRSGIERFSDQRGKLWCGLATYWIRRGSFERARDVFEEGITTVMTVRDFTL
VFDAYTEFEESIIGALMELASKRAENGVVDEAADFDLDIRMMRFEHLMDRRPFLLNDVLL
RQNPNNVAEWEKRVALWGDNHQEVVQTYTDAIATIQPKKAVGAFHQLWANYAKFYEKGGD
LRNARIIMEKAVKVPFKSVAELADMWIEWAEMELRNENFDEAVRIMAKATQAPKRSTVDY
FDETLSPQQRVHKSWKLWSFYVDLVESVSSLEETRKVYERIFELRIATPQTVVNYANLLE
EHKYYEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKISIERLRDLFEQAVTDCPPKF
AKVLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRADMFNFYITKSASNFGLPSTRPI
YERAIATLPDNEARDMCLKFADMEKRLGEIDRARAIYGHCSQFCDPRTDPEFWAKWEQFE
VQHGNEDTFKEMLRIKRSVQAKYNTDVHFIASQALARSQAQRQQNGGEQQVDPEVADAME
QLERQARAPAGFVAASEGIKGSVESRPVEVSNPDAIDLDGMDE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaccactacctccggccgccagccagacctggctttggtgtcggaggacgat
ttcgcctacgagcaagacatccaacgcaaccccggaagcaccaagccgtggctggcctac
atcgagtacaagctccagcacgggacagaacgggaacaggcgtttgtcatggaaagggcc
tgtgtccagttgccccgatcgtacaagctgtggaagatgtatctccggttcagggtgaag
cacgtttcgaagctcaacgctgccatcttcgctgccgagtaccagaaggtcaatgcgctt
ttcgaacgggcactcatcctcctcaacaagatgcccaggatatgggagatgtatctccaa
ttcctgatgcagcagcctcttgtgacggccacccgacgcgccttcgatcgcgcgctcagg
gcgctcccaatcacgcaacacaatcggatatgggcgctgtacaagccgtttgcgaactcg
gcggaaggtatgacggccgtcaagatctggcggcgctacatgcaagtccatcccgaggat
gccgaggacttcatcgagttgctggtccataccgggctgtacaccgaggccgtaaagaag
tacatcgaaatcctcaacaacccgcgctttcagagcaagaacgcaaaggggcactacgag
ttgtggagcgaaatggtcgatctcctggtcgagcatgccgtcgacattgacacggggcac
gagagcgagatcgacgtggaagccatcatccggagcgggatcgagcggttcagcgaccag
aggggtaaattatggtgcggcctggcaacctactggatcaggcggggcagtttcgagcgt
gcaagggacgtgttcgaggaaggcatcactacggtcatgacagttcgagactttacgctc
gtatttgacgcgtacaccgagtttgaggagtccatcataggagccttgatggagcttgcg
tcgaaacgggccgaaaatggcgtggttgacgaggccgccgacttcgacctggacatccgc
atgatgcgtttcgagcacctgatggaccgccggccgttcctcttgaacgacgtcttgctc
cggcaaaatcccaataatgtcgccgagtgggagaagcgagtcgcgctatggggcgacaac
caccaggaagtggtgcagacgtacacggacgctatcgccaccatccagccaaagaaggcg
gtcggcgccttccatcaactatgggccaactatgccaagttctacgagaagggaggagat
ctgcgcaatgcccggatcatcatggagaaggcggtcaaggtcccgttcaagtcagtggcg
gagctcgccgacatgtggatcgaatgggccgagatggagctgcggaacgagaactttgac
gaggccgtcaggatcatggccaaggccacacaggcgcccaagcggtcgactgtggactac
ttcgacgagacgctctcgccgcaacagcgggtgcacaagagctggaaactgtggagtttc
tacgtcgaccttgtcgagagcgtgagctcgctcgaagagaccaggaaggtctacgagagg
atattcgagctccgcatcgcgacaccgcagaccgtggtcaactacgccaacctcctcgaa
gagcacaagtactatgaagaatcgttcaagatctacgagcgcggcctcgacctcttcagc
tacccggtcgcctttgagttgtggaatctctacctcaccaaggcggtcgatcgcaagatc
agcattgagcgactgagagacctgttcgagcaggccgtcacggactgcccgccaaagttc
gccaaggtcctctacctgatgtacggcaacctcgaggaggagcgggggctggcccgccac
gccatgcgcatctacgagcgggccacgcgggcggtctcggacgaagaccgggccgacatg
ttcaacttctacatcaccaagtcggcgtccaactttggcctgccgtcgacgcgtcccatc
tacgagcgggccatcgcgacgctgccggacaacgaagcgcgcgacatgtgcctcaagttc
gcggacatggagaagaggctcggcgagatcgaccgggcccgggcgatctacgggcactgc
tcgcagttctgcgacccgcggacggacccggagttctgggccaagtgggagcagttcgag
gtgcagcacggcaacgaggacacgttcaaggagatgctccgcatcaagcgcagcgtccag
gcgaagtacaacaccgacgtccatttcatcgcctcgcaggcgctggccaggagccaggcg
cagcggcaacagaacggcggcgagcagcaggtggaccccgaggtcgcggacgcgatggag
cagctggagaggcaggcccgcgcaccggcaggctttgtcgccgcatcggaagggatcaag
gggagtgtggagagcaggccggtcgaggtgtccaatcctgacgccatcgaccttgatggc
atggacgaatga
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