Thermothelomyces thermophilus: MYCTH_2300457
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Entry
MYCTH_2300457 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03013
Nucleocytoplasmic transport
mtm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MYCTH_2300457
03015 mRNA surveillance pathway
MYCTH_2300457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_2300457
Enzymes [BR:
mtm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYCTH_2300457
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
MYCTH_2300457
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
CMS1
PG_binding_5
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
11511952
NCBI-ProteinID:
XP_003661273
JGI:
2300457
UniProt:
G2Q7B7
LinkDB
All DBs
Position
2:complement(join(1158779..1159261,1159321..1159558,1159615..1160330))
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AA seq
478 aa
AA seq
DB search
MADLASRISKPSDAPADDGAAPATATAEGNGAEKHVDEGTNNGLVETSYDVEVKLSDLQA
DKDSPLYSVSSFEELGLPKPINDGLLAMNFKKPSKIQERALPLMLSNPPSNMIAQSQSGT
GKTAAFVLTVLTRIDLTKPTQPQALLLAPSRELARQIQGVIQTIGKFCENLIVEAAIPGS
ISRETGVKGSVVVGTPGTVMDLIRRRQFDVSQLKILVIDEADNMLDQQGMGDQCVRVKGL
IPRTVQILLFSATFPDKVMNFARKYAPNANEIKLRHQELTVKGISQMYMDCPDESKKYDI
LCKLYGLMTIGSSVIFVKTRESATEIQRRMEADGHKVSALHGAYEGQNRDALLDDFRSGR
SKVLITTNVLARGIDVSSVSMVINYDIPMKGFGDKEQPDMETYLHRIGRTGRFGRVGVSI
SFVYDRKSFEALSQIANYYGIDLVQLSPDDWDETERRVQEVIKSSRARPDYAPNPLGN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctagcgagccgcatctccaaacctagcgacgcgcctgccgacgacggagcc
gctccggctactgccaccgccgagggaaatggcgctgagaagcacgtcgatgaagggacc
aacaacggtcttgttgagacgtcgtatgacgtcgaggtgaagttgagcgatcttcaagcc
gacaaagacagtcccctttactcggtctcgtccttcgaggagctcggccttcctaagccg
attaacgacggcctcttggccatgaacttcaagaaaccatccaagatccaggagagggct
ttgccgctcatgctcagcaatccacccagcaacatgatcgcccagtcgcagtcgggcacg
ggcaagacggccgcctttgtcctcactgttctaacacgcatcgaccttaccaagcccacg
cagcctcaagcgctgcttctcgctcctagccgagagcttgcgcgccagatccagggcgta
atccagaccatcggcaagttctgcgaaaacctgatcgtcgaggccgccattccgggctcc
atctcgcgcgagaccggtgttaagggcagcgttgtggtgggaaccccgggaactgtcatg
gacttgatcaggcgtcgccagttcgacgtgtcccagttgaagattctggttatcgacgag
gccgacaacatgctggaccagcagggtatgggcgaccaatgcgtccgcgtcaaggggctg
attccacgaaccgtccagatcctcctgttctctgccacgttcccggacaaggttatgaac
tttgcccggaaatacgcgccaaacgccaacgagattaagcttcgccaccaggagcttacg
gtcaagggtatttcccaaatgtacatggactgcccggatgagagcaagaagtacgatatt
ctttgcaagctctacggcttgatgacgatcggctcttcggtcatcttcgtcaagacacgt
gagagcgccacggagatccagcggcgcatggaggcggacgggcacaaggtctcggcgctg
cacggtgcgtacgaggggcagaaccgtgacgccctcctcgacgacttccggtcgggccgc
tccaaggtgctcatcaccaccaacgttctcgcgcgcggcatcgacgtgtccagcgtgtcc
atggtgatcaactacgacattccgatgaagggcttcggtgacaaggaacaacccgacatg
gagacgtatctccaccgtatcggccggacgggccgtttcgggcgcgtcggcgtcagcatc
agcttcgtctacgaccgtaagagtttcgaggcgttgtcacaaatcgcaaactactacggc
atcgatctggtccagctgagcccggatgactgggacgagacagagagaagggtgcaagag
gtcatcaagtcgagtcgggcgcgccctgattatgcccccaatccgctcgggaattag
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