Thermothelomyces thermophilus: MYCTH_2302465
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Entry
MYCTH_2302465 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCTH_2302465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_2302465
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MYCTH_2302465
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
MYCTH_2302465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
11512231
NCBI-ProteinID:
XP_003662178
JGI:
2302465
UniProt:
G2Q7S4
LinkDB
All DBs
Position
2:join(4523236..4523775,4523927..4524109)
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AA seq
240 aa
AA seq
DB search
MATKPPAVAIPGQLLGPASRYQPGPGTHLHGANLYASLLGQVHVSQPARAPGPAKRLTKI
TPAPAPAELPTISVSAPRLSSSSSSRVGGGAAAAAGCGAEGEGRRKMKREVLPEVGNVVL
CRVLRITPRQAVVAILVCGDTVLDAEWQGLIRVQDVRATEKDRVKIYESFRPGDIVRAEV
ISLGDQTNYYLSTAKNELGVVLAVSEAGNTMQPVSWKEFRDPETGAIELRKVAQPQPQPQ
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaagcctcccgccgtcgccatcccaggccagctcctcggcccggcctcgcgg
taccagcccggcccgggcacccacctgcacggggccaacctgtacgcctcgctgctcgga
caggtgcacgtcagccagccggcgcgcgcgccgggcccggccaagcggctgaccaagatc
actcccgccccggcgccggccgagctgccgaccatttccgtgtccgccccgcgcctgtcg
tcgtcgtcgtcgtcccgggttggtggtggcgccgccgccgccgcggggtgcggggcggag
ggcgagggcaggaggaagatgaagagggaggtgcttcccgaggtgggcaacgtggtgctg
tgccgggtgctgcgcatcacgccgcggcaggcggtcgtcgcgatcctcgtgtgcggggac
acggtgctcgacgccgagtggcagggcctgatccgggtgcaggacgtgcgggcgactgag
aaggaccgggtcaagatctacgagagcttccggccgggggatattgtccgggcggaggtg
atctcattgggcgatcagacgaactattacctgtcgacggcgaagaatgagttgggagtg
gtgttggccgtcagcgaggcgggcaatactatgcagccggtgagctggaaggagttcagg
gatcccgagacgggagcgattgagttgaggaaggttgcgcagccgcagccgcagccgcaa
tga
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