Thermothelomyces thermophilus: MYCTH_2303581
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Entry
MYCTH_2303581 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K14311
nuclear pore complex protein Nup188
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MYCTH_2303581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_2303581
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MYCTH_2303581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_C
Nup188_N-subdom_III
Nup188_SH3-like
Nup188_N
Motif
Other DBs
NCBI-GeneID:
11512746
NCBI-ProteinID:
XP_003662670
JGI:
2303581
UniProt:
G2QD05
Structure
PDB
PDBj
LinkDB
All DBs
Position
3:complement(join(980490..981851,981958..986008,986081..986151))
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AA seq
1827 aa
AA seq
DB search
MATLTDRSYFPPLGECLSGNKIILSWRLVATALEDLACDRLRSAAVSAFLRDGYVHQLLR
EPTKTFAPPTNETKLDFETKTGAINVVPSPNDPYNLDTIKDDARWLSRNVNINEVAALRV
VIIEYQSRAHSHLTGPLSTQDVANVQEAAGVGDAQASAIVALLNVTTVADADSAWADFES
ETTRRRRLLATYLSERRSFLAAVDALLAFLLHSRAPGTGVELDPLRNAVLQGAFGFDQNA
AKPDTTQLDALAPTYIRTLEGCFDRMQMAPESLDNQMLTEQFEVDWIRTALTEAIHAMSL
IFQILDLKASQFAAPALVTQWFALMDTCEFFEPVPRGHELIAELLMPLHSLVAAISLKLL
NVDRTLSYLDQDVDLLEEEEPYLASSDNLAQMHTTIAAAASAGLISTMPVVFAWSLILHQ
MHVGYQERAERRDLLQNQRAQAGFELEYEPSGRQRRNSAGSIVSIEASSYDVFLVSQQLE
RNIEPAENMARIATGRGQVYELMADMAVCLGSGQLAAFRPVLGARARLTFQDLLKRSAHY
VGYQAEPVSCLLSILSGGSQYWDISAEAPSNEKSALDIYTRMLSDDTLNVQYASQSRNRF
PYEFLPFASMCRILSAALVSDNESSELITGLLVKNPSLTLNWDPRWDRSYELVFEEENTN
SFRLTKDIDLFDAASKSNRRILPEEKCTISRGTFGRFVTDVGRVAKLEFEHSTLALFGKR
LEVNLMAGAYDTALGYLSADELIEGISLLATVLRAETLRSSKTDPDRGLRILTEASRLLS
RGRDIMNVVCDTLDSLVEEELADLDGPKTAALSSCLQFLHAALPVCPGRVWAYMARCPLI
NTDTRSGRLSRITANLDMLAERYDLLLSAVKLFSSLVDSAKTSAVQRRSGISVNSRAKGE
ENPWIGASDKIVSRVTLSIAQTSVDVFENSATWRFPSEVDRSVMIRDVVGIMHKLMLYTH
SVGSTDTPRSLTGPLAPAADYVVESFLSSSSSSLRFQPLLATLLAAFQLPDTTIYQRRAQ
IVSERLTTVLEFATILLRVADYLNKASAGIQTQLFKSACVIARLPAIRHSFRIPAISLLS
ALVESAGKSSGEPPSLLGYLGPQVSRSFIQIAAQLDKPFDRVAEVASTWRFFSTILRNRQ
QWMANCLLTGKTPREALKGEAKISQLTAGSVLSTALEKLRAIKDISSQELLAVLDFFTSA
QNYWPWTIFAMQKDKTFLQELRAYVRDLKAPAVVSKANPAEACYQARIAAYIAETFAMQL
YHLRQMRQEQTFAAEVVNDLDYFLRDGVAVSDYNSSLHANFSRNFAKQYQGFSVDDFKRT
LLVPRDLGSQYYYALDVAESMLSYDAGWAGPRQNGFRREMEAANLNLSLVEAEVALFHAW
EYLLLELSICLLPKHQSVARQMLQVAEQCLEANQRPQPPENIFVVLAHSRANLGLTLLQR
LADYSLLPKDISQLLSLVSATINGVDNPWSKDQISYFRTLLKVLFVVLRGTKHSNNAAPQ
KPTAESPVAVTQLVLTTLDRVVARSFRNLAALVHEPDAATTPEDLALITAILQACLSVPG
IEQCQLQVLNIMSSHNVLQVATSLFSWSDRLAEKGDPIYGELALLLLLELSALPALAEQL
ACDGLLGHLTSANLAGFMRRANVSPFTDNAGAARCYAIWAKGILPLLLNILGALGATIAP
EVAFVLNQFPNLLRSSVDRLEAPGLSRTVPLSSRDAPGAGPHYFVALVALSEVHSLALLT
RVLAALRSGNARDIPEVVWDSGAVLENVEFWLASRKVLRERLLPLNPREAEWRGMKASEG
SGCETKLEEKAVGLLEGIRDVLAEEEE
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttgaccgatagaagctattttccgccgctcggggaatgtctaagcggcaac
aaaataatcctctcctggagactcgtcgccaccgctcttgaagatctagcatgcgaccga
cttaggagcgccgccgtctcggccttcctccgcgacggatatgtccaccagttgttgagg
gaacccaccaagacttttgcgccgcccacgaatgagaccaagctcgattttgagaccaag
accggggctatcaacgtcgtgccttcgccaaacgacccctacaatctcgacacgatcaag
gacgatgcgcggtggttgagcagaaacgtcaacattaacgaggttgccgccctccgcgtc
gtcattatcgaataccagtcacgcgcccacagccacctcaccgggccgctgtccacgcaa
gatgtcgccaatgttcaagaagctgccggtgtcggggatgcgcaggcctcggctatcgta
gcgctgctcaacgtcacaacagtcgctgatgccgattctgcctgggctgacttcgagagc
gagacgacccgtcgccggcgcctactcgctacctacctttctgaacgtcggtcgtttctg
gctgccgtcgacgcgctactcgcattcctcctgcactcgcgcgcgccaggtaccggcgtg
gaactggaccccttgcgtaacgctgtcctgcagggcgcattcggcttcgatcagaatgcg
gcgaagcccgacacaacccaactggatgccctcgcgccaacatacattcgcactctcgag
ggctgcttcgacaggatgcagatggccccggaatctctggacaaccagatgctgacggag
cagtttgaggtcgactggatcaggacggcgcttaccgaggccatccacgccatgtcgctg
atctttcagatcctggatctcaaagcctcccagttcgcagcccccgcgctcgtaactcag
tggtttgccctcatggacacctgcgagttcttcgaaccggtccccaggggccatgagctc
attgccgagctgctcatgccgcttcacagtctggttgccgccatctccctgaaactgctc
aacgtcgaccgaaccctctcgtacctcgaccaagacgtcgacctgctggaggaggaggag
ccctacttggcttcgtccgataacctcgcgcagatgcacaccaccattgcagccgctgct
agcgccggtttgatctcgacgatgcctgtcgtgttcgcctggtctctcattctacaccag
atgcatgttggttaccaggagcgcgctgagcggcgcgatttgttgcagaatcagcgggcg
caggctggctttgaactggaatacgagccgtctggccgccagcggagaaactcggctggg
agcattgtctccatagaggcatcttcgtacgacgtattcctcgtctcccagcagttggaa
cgcaacatcgagccggcggaaaacatggctcggattgccactggccggggtcaggtctat
gagctcatggccgacatggccgtttgcctaggaagcggccagctggccgcgttccgcccg
gttctaggcgcccgcgctcgcctgaccttccaggacctcctgaaacggagtgcccattac
gtgggttaccaggcggagccggtctcgtgtttgctttccatcctctcggggggtagccag
tactgggacatctctgccgaggctccttctaacgagaagtccgcccttgacatttacact
cgcatgctgagcgacgacacgctcaacgtgcaatacgcctctcagtcccgaaatcgcttt
ccctacgaattcctcccctttgcctccatgtgccgcatcctgtcggcagccctggtctcg
gacaatgaaagctccgaactgatcactggccttctcgtgaagaacccgagcctgactttg
aactgggacccgcggtgggacaggtcttacgagctggtcttcgaggaggagaacacaaac
tccttccgtctgaccaaggatatcgatctcttcgacgcagcatccaagtctaataggcgg
atcttaccagaagagaagtgcacaatatctcgtgggacgtttggtcgcttcgttaccgac
gttggcagggttgccaagctggaattcgaacattccaccctggctctctttgggaagcgt
ctcgaggtgaatctcatggcaggtgcctacgacaccgcgctggggtacctgtcggcggat
gagcttatcgagggcatctccttgttagcgacggtgctgcgcgccgagacactcaggtcc
tccaagacagacccggacaggggcttgaggatactgaccgaggctagccgtttgctctcc
cggggcagggacatcatgaacgttgtctgcgacacgctcgacagtctggttgaggaggaa
cttgctgacttagatgggcccaagactgccgccttgtcatcatgccttcagttcttgcat
gcggcgcttccggtatgtcctggccgggtttgggcatacatggcacggtgcccgctcatc
aacaccgacactcgatccgggcgcttatcgaggatcacagccaacctcgacatgcttgcc
gaaagatacgatcttctcttgtcggccgtgaagctgttctccagcctcgtggacagtgcg
aagacaagcgcggtgcaacggaggtcgggtatcagcgtcaacagtcgcgccaagggggag
gagaacccgtggatcggggcttcggacaagatcgtatctcgggtaactctctcgatcgcg
cagacgagcgtcgacgtgtttgagaattccgccacgtggaggtttccctctgaagtggac
cgcagcgtcatgatccgggacgtggtgggtatcatgcacaaactcatgctttacacacat
agcgtgggatcgaccgatacgccgaggagcctgacggggccgctcgctcctgcagccgac
tacgtcgtggagagcttcctctcgagctcgtcgagttcgctgcgattccaaccacttctg
gccactctactagccgcctttcaactaccagacacgacaatctatcagaggcgagcccag
atcgtgtcggaaagactgactacggtcttggaattcgcaaccatcctcttgcgagtcgct
gactatctaaacaaagcgtcagcaggcatccagacccagctgttcaagtcggcatgtgtt
attgctcggcttccggccatcaggcactctttcaggataccggctatttctcttctcagc
gcgctcgtggagagcgccggcaagagcagcggtgagcctccgtctctgctaggttacctg
ggcccgcaagtatcgcgctccttcatccagattgctgcgcagctagacaaaccgttcgat
cgagtagccgaagtggcgagcacatggaggtttttctcgaccatcttgcgcaaccggcaa
caatggatggcaaactgcttgctcacgggcaaaacgccgcgggaagcactcaagggcgag
gccaagatctcacagctcaccgcgggctctgttttgtcgaccgcgttagagaagctgcgc
gccatcaaggatatctcgagccaagagctccttgccgttctcgacttcttcacatcagcg
caaaattactggccatggaccatctttgccatgcagaaagacaaaacgttcctgcaagaa
ctccgggcctacgtccgtgacctcaaggctcccgcggtagtgtccaaagccaatccagcc
gaggcgtgctaccaagcgaggatagcagcctacatcgccgagacctttgccatgcagctg
taccatctgcggcagatgcgccaggagcagacttttgccgccgaggtggtgaatgatttg
gactacttcctccgggacggcgtcgcggtgtcggattacaactcgtcgctgcatgccaac
ttctcgaggaattttgccaagcagtatcagggattttctgtggacgacttcaagaggacc
ctcttggtgccgcgggacctgggatcccagtattactacgcgttggacgttgccgagtcc
atgctcagctatgatgcgggctgggccgggccacgacagaacggtttcaggcgtgagatg
gaggcggcgaacctgaatctgtccctcgtagaggccgaagttgcgctgttccatgcttgg
gagtacctgcttttagagctcagcatctgtttgctcccgaagcaccaatccgtcgcaagg
cagatgttgcaggttgctgagcaatgcttggaggcaaaccaacgtccacagccgccggag
aacatctttgtggtccttgcccactcgagggcaaatttggggctgacgctactccaacgg
ctcgcagattactcacttctccccaaggacatcagccagcttctctcgttggtgtccgcc
accatcaacggtgtcgacaatccctggagcaaagaccagatctcgtacttccgcaccctc
ctcaaggtcctctttgtcgtccttcgcgggaccaagcattccaacaacgctgctccacaa
aaacccaccgccgaaagcccggtcgcggtcacacagttagtcctcacgaccctcgaccgc
gtcgtcgccaggtcgttccgcaacctcgccgctctcgtccacgagccggatgcagcgacc
actcccgaagacctcgccctgatcaccgccatccttcaggcgtgcctgagcgtcccgggc
atcgaacaatgtcaactccaagtgctcaacatcatgtcatctcacaacgtcctgcaggtc
gccacctcgctcttctcctggtctgatcgcctcgccgagaaaggggaccccatctacggc
gagctcgccctgctcctcctcctcgagctctccgccctgcccgccctcgccgagcagctc
gcctgcgacggcctcctcggccatctgacctcggccaacctcgccggcttcatgcgccgc
gccaacgtctcacccttcaccgacaatgccggggccgcccgctgctacgccatctgggcc
aagggcatcctgcctttgctgctcaacatcctgggcgccctgggggcgaccatcgcccct
gaggtcgccttcgtgctcaaccagttcccgaacctcctccgctcgtcggtcgaccgcctc
gaggcgccgggactgagtcgcaccgtgccgctctcgtcgcgcgacgcccccggcgccggc
ccgcactactttgtcgcgctcgtcgccctgtccgaggtgcactctctggcgctgctcacg
cgggtgctggcggcgctgaggtcgggcaatgcgcgggacatccccgaggtggtttgggat
tcgggcgcggtgttggagaacgtcgagttttggctggccagccggaaagtgctccgggag
agactgctgccgttgaaccccagggaggcagagtggagggggatgaaggctagcgagggg
agcgggtgcgagacgaagctggaggagaaggcggtcgggttgttggaagggattcgagat
gtcttggcagaggaagaggagtag
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