Thermothelomyces thermophilus: MYCTH_2304190
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Entry
MYCTH_2304190 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCTH_2304190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtm03021
]
MYCTH_2304190
03041 Spliceosome [BR:
mtm03041
]
MYCTH_2304190
03036 Chromosome and associated proteins [BR:
mtm03036
]
MYCTH_2304190
Transcription machinery [BR:
mtm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
MYCTH_2304190
Spliceosome [BR:
mtm03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
MYCTH_2304190
Complex B
MYCTH_2304190
Complex C
U2 SnRNP specific factors
MYCTH_2304190
Chromosome and associated proteins [BR:
mtm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
MYCTH_2304190
TFTC complex
MYCTH_2304190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
11507570
NCBI-ProteinID:
XP_003662944
JGI:
2304190
UniProt:
G2QEB6
LinkDB
All DBs
Position
3:complement(join(1909060..1909086,1909151..1910438,1910625..1912701,1912879..1913122))
Genome browser
AA seq
1211 aa
AA seq
DB search
MATTSNMFLYSLTIQPPTTITQALLGQFSGTREQQIIIASGSRLSLLQPDPRQGKVNTLL
SHDVFGIIRAIASFRLAGSHKDYIILATDSGRIAIIEYQPKTNRFSRIHLETFGKSGVRR
VVPGQYLAADPKGRACLIASIEKNKLVYVLNRNAQAELTISSPLEAHKPGVLVLSLVALD
VGYANPVFAALEIDYTEADQDPTGEAAKETEAQLVYYELDLGLNHVVRKWSDVVDPTSSL
LFQVPGGNDGPSGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPQRKRTIVSGVMHKL
KGSAGAFFFLVQTEDGDLMKVTLDMVEDNDGNPTGEVRRLKIKYFDTIPIAKSLCILKSG
FLFAASEFGNHHFYQFEKLGDDDDEQEFTSDDFPTDPRASYNPVYFRPRPLENLVLVESI
DSMNPLVDCKVANLTGEDAPQIYAVCGNRARSTFRMLKHGLEVSEIVASELPGTPAAVWT
TKLTKYDEYDGYIVLSFTNATLVLSIGETVEEVTESGFLTSVPTLAVQQMGEEGLIQVHP
KGIRHIVQGRVNEWPAPQHRSIVAAATNENQVVIALSSGEIVYFEMDADGSLAEYDEKKE
MSGTVTSLSIGKVPEGLRRSSFLAVGCDDCTVRILSLDPESTLEMKSIQALTSAPSSLSI
MSMEDSTGGMTLYLHIGLHSGVYLRTVLDEVTGELTDTRQKFLGPKPTKLFQVSVQNQAC
VLALSSRPWLGYTDPITKNFVMTPLNYSELEYGWNFNSEQCLEGMVGIHANFLRIFTIDK
LGETMIQKSIPLTYTPKRLVKHPEQPYFYTIESDNNTIPPELRAQLLAQSGAVNGDATVL
PPEDFGYPRATGRWASCISIVDPLGDEPKVLQRIDLEGNEAAVSAAVVPFASQEGESFLV
VGTGKDMVLNPRKFTEGYIHVYRFHEDGRELEFIHKTKVEEPPLALIPFQGRLLAGIGKM
LRVYDLGLRQLLRKAQGEVAPQLIVTLQTQGSRIIVGDVQQGVTYVVYKPESNKLLVFAD
DTINRWTTCTTMVDYESVAGGDKFGNVWILRCPERASQESDEPGSEIQLLHARKYLHGAP
NRLDLMVHFYTQDLPTSIVKTNLVVGGQDVLVWSGIQGTVGVLIPFVSREDVDFFQSLES
HMRAEDPPLAGRDHLIYRGYYVPVKGVIDGDLCERFSLLPNDKKQMIAGELDRSVREIER
KISDIRTRSAF
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacatcgaacatgttcctgtactcgctgacgatccagccgccaacaaccatt
acgcaggcgttgctgggtcagttctcggggactagggagcagcaaatcatcattgcctcg
ggctcgcgcctttctctgttgcagcccgaccccaggcagggcaaggtcaacactctgttg
tcgcatgacgtttttggcatcatcagagccattgcctcattccgcctcgccggcagccac
aaagactacattatcctcgccacagattccggccgcattgccatcattgagtaccagccc
aagacgaacagattctcgcggattcatctcgagacctttgggaagtcgggagtgcgtcgc
gttgttccgggccagtacctggctgccgaccccaaagggagagcgtgcttgatcgcttca
atcgagaagaacaagctggtttacgtcctgaatcgaaacgcgcaagctgagctgaccatc
tcgtcgccgcttgaagcccacaagccaggtgttttggttttgtcccttgttgcgctcgat
gtcggttacgccaacccggtctttgcggcccttgaaatcgactacaccgaagccgaccag
gacccgacaggcgaggcagccaaggagaccgaggcccaactcgtctactacgagcttgac
ttgggcttgaaccacgttgtgcgcaagtggtcggacgtcgtcgacccgacctcgtccctc
cttttccaggttccgggaggcaacgatggccccagtggtgtcctagtctgtggggaggag
aatatcacgtaccgccactccaaccaagaagccttccgcgttcccattcccaggcgtcgc
ggtgctaccgaggacccgcagaggaagcgcaccattgtctcgggtgtgatgcacaagctg
aagggcagcgcaggcgccttctttttcctggttcaaacagaagacggcgatctaatgaag
gtcacactagacatggtcgaagacaacgatggtaacccgactggcgaggttcgtcgtctc
aagatcaaatactttgacacgatacccatcgccaagagcttgtgcatcctgaagagtggc
ttcctcttcgcagccagcgaatttggtaaccaccacttttaccagttcgagaagcttggg
gacgacgacgacgagcaggagttcacaagcgacgacttcccgacagaccctcgggcatcg
tataaccccgtttatttccgccctcgccccctggagaacctggtgcttgtggagagcatc
gattcgatgaaccctttggtcgactgcaaggtcgccaatttaactggcgaagatgcgcca
cagatctacgcggtctgcggaaacagggcgagaagtaccttccgtatgctgaagcatggc
ctggaggtgtcggaaattgttgcgtccgagttgccgggcacgccagcggcggtctggaca
accaagctcaccaagtatgatgagtatgacggctacatcgtgctgtccttcacaaacgca
acacttgtcctgagcatcggggagacggttgaagaagtcactgaaagcggtttcttgacc
agcgtgcccaccctggctgtccagcaaatgggtgaggaggggttaatacaggtgcacccc
aaaggtattcggcacatcgtccaggggcgcgtcaacgaatggccggctccccagcatcga
tcgatcgttgctgctgcgacgaatgagaaccaggtcgtaatcgccctgagctctggcgag
attgtctactttgagatggatgccgatgggtctcttgccgagtacgacgagaagaaagag
atgtctggcacggtgacgtccctcagcattggcaaggtgcccgaagggctgaggcggagt
tcgttcttggctgttggctgtgacgactgcacagttcgcattctcagccttgatcccgag
tcaacgctggagatgaagtccatacaggccctcacatcggcgccatcatcgctttccatc
atgtctatggaggattcaaccggcggcatgacgttgtacctgcatatcggccttcattct
ggagtctatttgaggaccgtcttggatgaggtgaccggcgagctgaccgacacgcggcaa
aagtttcttgggccgaagcccacaaagctgttccaggtctctgtgcagaaccaggcgtgc
gttctcgcgctcagctcgaggccatggcttggctacaccgatcctattaccaagaacttc
gtgatgacgccgctaaactattccgagcttgagtatggttggaacttcaacagcgagcag
tgcttggaaggcatggtcggcatccatgcgaatttcctcaggatcttcacaattgacaag
ctgggcgaaaccatgattcagaagtcaatcccactcacctacaccccaaagaggctggtg
aagcatcctgagcagccgtacttctacactatcgaatccgacaacaacaccataccgccc
gagttgcgggcgcaactcctagctcagtcaggggccgtcaatggagatgcaacggttctg
ccgccggaagattttggttacccccgggcaacgggccgatgggcatcctgcatcagcatc
gtggacccgcttggtgacgagcccaaagtcttgcaaaggatcgaccttgagggcaacgag
gcagcggtgagtgccgccgtcgttccctttgccagtcaagaaggcgagagcttcctcgtt
gtcggaaccggaaaggatatggtgctcaacccacgcaaattcaccgaaggatatattcat
gtgtaccggttccacgaggatggcagggagcttgagttcatccacaagaccaaggtcgag
gagcctcccctggctctaattccattccaggggcgcctccttgctggcatcggcaagatg
ctccgggtttacgatctcggtctccggcagttgctcagaaaagcgcaaggggaagtagcg
ccgcaactcattgtcacgctccagactcagggcagccggatcatcgtgggcgacgtccaa
caaggcgtaacatatgtcgtttacaagccggagagcaacaagctgctggtctttgccgat
gacaccatcaacaggtggactacgtgcaccaccatggtggattacgaatcagttgctggc
ggcgacaagttcggcaacgtctggattcttcgttgccccgaacgagccagccaggagagc
gacgagccgggctcggaaatccagctgctccacgcccgtaaatacctccatggcgccccg
aaccgcttggacctgatggtgcatttctatacgcaggatttgcccacgagcattgtcaag
accaacttggtagtgggcggacaggacgtgctggtatggagcgggatccagggcaccgtc
ggtgtgctgattccgtttgtcagccgcgaggatgtggacttcttccagagcctggagagc
cacatgcgggctgaggacccgccgctcgcggggcgcgaccacctgatctatcgcggatac
tatgtacctgtcaagggcgtcatcgacggcgatctctgcgagaggtttagtctgttaccc
aacgacaagaaacagatgattgctggggagctggaccgctcggtgcgggaaatcgagcgc
aagatttcggacattcggacacgatctgctttctga
DBGET
integrated database retrieval system
