Thermothelomyces thermophilus: MYCTH_2304865
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Entry
MYCTH_2304865 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MYCTH_2304865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_2304865
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
MYCTH_2304865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
11507848
NCBI-ProteinID:
XP_003663222
JGI:
2304865
UniProt:
G2QBN4
LinkDB
All DBs
Position
3:join(3167105..3167642,3167705..3167964)
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AA seq
265 aa
AA seq
DB search
MSTITPTALQSSQPPIIPLDFNANQPETIRLYPLSNYTFGVKETQPEEDPSVLARLKRLE
EHYQAHGMRRTCEGILVCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEIEGFKARLDER
LAPVGSLGEGNKAGDWQVGDCLAQWWRPNFETFMYPFVPAHITRPKECKKLYFIQLPQTK
VLSVPKNMKLLAVPLFELYENTQRYGPQLSAIPHLLSRYNFEFVNEEGEVVARTPGTGGP
DGYVPKTKVLAGGDDVDMKTENGTH
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccatcacccctaccgcgctgcagagctcgcagccgccgattatccctctcgac
ttcaatgcgaatcagcccgagaccatccgcctgtaccctctctccaactatacatttggc
gtcaaggagacgcagccagaggaggatccgagtgtgctggcgcggctgaagcggctggag
gagcactaccaggcgcacggcatgcggcgcacctgcgagggcatcctggtctgccatgag
cacaaccatccccacatcctgatgctacagatcgcaaacgccttctttaagttgccggga
gactacctgcggcccgaggatgacgagatcgagggtttcaaggcacgcctggacgagcgg
cttgcccccgtcggcagcctcggcgagggcaacaaggctggcgactggcaggtcggcgac
tgccttgcgcagtggtggcgcccgaacttcgagacgttcatgtacccgttcgtgccggcg
cacatcacccgtcccaaggagtgcaagaagctgtacttcatccagctgccgcagaccaag
gtcctgagcgtgccaaagaatatgaagctgctcgccgttcccctttttgagctctacgaa
aatacccagagatacggccctcagctctccgctatcccccaccttctgagccgctacaac
ttcgaattcgtcaacgaggagggcgaggtggtcgccaggacgcccggtaccggcggtccc
gacggttacgttcccaagactaaggtcctcgccgggggcgacgacgtcgacatgaagacg
gagaacggcacgcactga
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