Thermothelomyces thermophilus: MYCTH_2307323
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Entry
MYCTH_2307323 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCTH_2307323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_2307323
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MYCTH_2307323
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MYCTH_2307323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
ABC_tran_CTD
WKF
DUF7310
DUF1192
Motif
Other DBs
NCBI-GeneID:
11514411
NCBI-ProteinID:
XP_003664468
JGI:
2307323
UniProt:
G2QFK6
LinkDB
All DBs
Position
4:join(3555064..3556102,3556162..3556748)
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AA seq
541 aa
AA seq
DB search
MEKFKAVEKAMKTKAYSKEGLSAAAKLDPKEQAKLDAGEFLGSMVDELEQQIETLEAESE
SIQATMKKGKGHAAKAERIAEIERIIERHKWHQGKLELIRRSLENGGVDAEQVQDLGENI
KYYVSDGMNEDFMEDETMYDDLNLQDEEDQYGMNLDNDKVSSQDTQSIQEDANQEAETKP
SGPSGKQRSAVDAVAASAVRRPSTQLKSPLPTLATVHSTPLPTLNTGSSATAGMKPATAP
TRPAGEGLKYASAAAAAANNVGIAPLPPPPPAPSSVSGASIPAQVRTSAANSPSVPSIQP
ASQEKASNANVAPSSGATAANQSHKTPAKGKAVAQASPADTADGAKGAQANGAANGIRPI
EETEEEEESIYHLPASLQDLVESFEVTKKRPAPINAPATQRMQAASEANKPGILDSEPPR
NYQPDVKFHSHTRYPQEPLSIFDDPRLYSRIDPDTLFYVFYYKQGTYQQYLAARALKDQS
WRFHKQYQTWFQRHEEPKSITEEFEQGTYRFFDYESTWYDQIFGEKMFRTCDHSMANLEA
G
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagttcaaagctgttgagaaagccatgaagaccaaggcttactcaaaggaagga
ctatctgccgccgccaagctggatcctaaggagcaggccaaactggacgcgggcgagttc
ctcggcagcatggtcgatgagctggagcaacagatcgagactcttgaggccgagagcgaa
tcaatacaggcaaccatgaagaaggggaaaggccacgcggcgaaggcggagcgcatcgcc
gaaatcgagcgcatcatcgaacggcacaagtggcaccaggggaaactcgagttgatccgg
cgctcgcttgaaaacgggggagttgacgccgagcaggttcaggatcttggggagaatatc
aagtactacgtgtcggacggcatgaacgaggacttcatggaggacgaaaccatgtacgac
gacctgaacctgcaagacgaggaggaccagtacgggatgaacctggacaacgacaaggta
tcctcacaagatacccagtcgatacaagaagacgcaaaccaggaggccgagacgaagccc
agcggcccgtcaggaaaacaacggagcgcggttgatgcagtggcagcgtcggctgtgcgg
cggccatcgacgcagctcaagtcgcccctccctacccttgcgaccgtgcacagtactccg
ctaccgaccctcaatactggctcttcggccactgcgggcatgaagccggccacggcgccg
acgaggcccgcaggtgagggcttgaagtatgccagcgctgcagcggcagctgccaacaac
gtcggcattgccccgttaccaccaccgcccccagcaccatccagtgtcagcggggcctca
ataccggcacaagtaaggacaagtgcggcaaactctcccagcgtcccgtccatacagccg
gcctcacaggagaaggcgtccaacgcgaacgtggcgccgtcaagcggggcgacagcggca
aaccagtcgcacaagacgccggcgaaaggaaaggcggtggcgcaggcaagccccgccgat
actgccgacggggcaaaaggggcgcaagcaaacggcgcggccaatggcattcgaccaatc
gaggagaccgaagaggaagaagagtcgatctaccacctccctgcctcattgcaagatctt
gtcgagtcattcgaagtcacgaagaagcgacctgcgccgatcaacgcgcccgcaacccag
aggatgcaggctgcctccgaggcgaacaagcctggtattttggactccgagccaccacga
aactatcagccggatgtgaagtttcattctcacacgcgctatccgcaagaaccgctgtct
atctttgacgatcctcggctgtatagcaggatcgacccggacacgctcttctacgtattc
tactacaagcagggcacttaccagcagtacctcgccgctcgggcgttgaaagatcagagc
tggaggttccacaagcagtaccaaacgtggttccagagacacgaggagcccaaatcgata
acagaggagtttgagcaggggacatatcgcttcttcgactatgagagcacatggtacgac
cagatctttggggaaaaaatgttccgcacatgtgatcattcgatggctaaccttgaagca
ggatga
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