Thermothelomyces thermophilus: MYCTH_2308660
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Entry
MYCTH_2308660 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MYCTH_2308660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtm03009
]
MYCTH_2308660
Ribosome biogenesis [BR:
mtm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MYCTH_2308660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap_D2
Nrap
Nrap_D3
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
11510950
NCBI-ProteinID:
XP_003665190
JGI:
2308660
UniProt:
G2QK39
LinkDB
All DBs
Position
5:join(2393254..2393490,2393543..2396674)
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AA seq
1122 aa
AA seq
DB search
MDSTPAKRRKLDHSQDDAEILLQSAASTGISRSRAFILETEELLDSVRLDYETALDGADN
LLHRIKGTIEGIKPHEALPIAQAASKLEKTTKIKVPFPDPQPQENSNYKVAFAKPAQFNV
VGSYVSKTMIKTQKDHGVDMVIVIPKEILQEKDYLHLRYFYKRAYYLAVVASSLREEFGS
EAQLSYEYLNGNPLCPVLAIQPNVSKEAELETSGKGRVLDFRIRILPCAPDGFFPTAKLH
LGATLVRKNRDGESNTSEPTSFYNSTLVAESCFLPYLKVLRQAEKKCAAFKNACILGRIW
LQQRGFGGDISQGGFGHFEWAVLLALLLQGGEAKALSPSLSATQLFKALVQFLSVTNFAE
KPCVFGPGKPDLESYCEVTPILYDSARQLNIAFKMGPWSAALLHQHAKWTRSLLANSSVD
QFNPTFILKADIPLHSFDLVARLKIDEAPADTGADSRGPAWQVSNKAYQILKRALVDKEM
GQRARLIHMQVPACHRSWPLTEGLGSQATSPVEIRILFDPINMARTVDRGPSAGPSAEEK
KACENFRKFWGDKSELRRFERDSIRETLIWTSTTPFGICEEIIRYILGRHLRIGHLHEEI
SVYGDGLPALLSLKPADTASFNVAKKAFGAFERDIRDLDELPLRVRQVAPICPELRQASV
KTPTFGSSKSGPRPLECVISFEASGKWPDSLVAIQRTKIAFLLMIGSLLERSKPGELKTH
VGLENAKYETENLAFLDVIYESGPSFRLRIHSDLEESLLERQVKDKTSEQYLRQRATTLL
ATFRRLYTNLPLHNQYISTCATRFPALSPTIRLVKHWFNVHKLSCHFTEEFIELAVLHVF
LSPYPWDAPSSINTGFMRTLLFLSHWDWRSEPLVVDTSGEMTASERASISTRLEAWRKID
PNMNHTVLLVATSQEPSGVAWTTADGQAKPSKVVAARMTSLAKSASRLIREQGVELDHRR
LFVPSLKEYDVLIHLNSKAFKSTLKTYANIDPEEEEEVARPKFKNLDERTGQEPLPLAQH
PADLFLEHLNATYGGPLVFFRGSVEDNTIGAIWNPQMQRRSFRINLPTSYKPVAAGKKQS
KSDEHEDDEEADLVDVNKEAILSEIARIGADLVEKIEVKSAS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggactcgacaccggcaaagcggaggaagcttgaccactcgcaagatgatgccgagatc
ctcttgcaatccgcagcctcaaccgggatctctcggtctagggcctttattctcgagaca
gaagagctactagattcggtgcgcttggattacgaaaccgctctggatggcgccgacaat
cttttgcaccggattaaaggcacgattgagggcattaaaccccatgaggcgctcccgatc
gctcaagcagcgtccaagctcgagaagacaaccaagattaaagttcccttcccagacccg
cagccgcaggagaactccaactacaaggttgcatttgccaaaccagcacaattcaatgtt
gtcggtagctatgtctccaagacgatgatcaagacgcaaaaggaccacggcgtcgatatg
gtgatcgtcattcccaaggagatcctgcaagagaaggattatcttcacctgcgttacttc
tacaagcgggcgtactatctggctgtcgtcgcctcttcgctgcgggaagaattcgggagt
gaggcccagttgtcctacgaatatctcaacggcaaccctctgtgccccgttctcgccatc
cagccaaacgtctcgaaagaagcagaattggagacgtcgggaaaagggagggtcttggat
ttcaggatacggattctaccttgcgcgccagacggcttcttcccaacagcaaaactccat
ctgggggccactctcgttcgcaagaaccgcgatggtgaatcgaatacttctgaacccacg
tcgttttacaactcgacactcgttgccgagagctgctttctgccatacctcaaggtcctc
cggcaagcggaaaagaaatgcgcagccttcaagaacgcctgcattttaggccgtatctgg
ctacaacaaagaggtttcggcggggacatttcgcagggtggatttggccactttgaatgg
gcggttctactagccctcctccttcaaggtggtgaggccaaagctctctctccctcgctc
agcgccacccaactattcaaggccctcgtccagttcttgtcggtgaccaacttcgccgag
aaaccttgcgtctttggccccgggaaaccggatctggaatcttactgtgaagtcacccca
atcctctacgattctgctaggcaactcaacattgcgttcaaaatgggtccttggtcggct
gctttgcttcatcaacacgcgaaatggacgagaagcttgcttgctaacagctcggtggac
caattcaatccgaccttcattcttaaggcggacatcccattacacagcttcgacctggtt
gcgcgtctgaagatcgatgaggcaccagcagacacaggtgcggactcgcgggggccagcc
tggcaagtcagcaacaaggcttatcagatcctgaaacgggctctggtcgacaaggagatg
gggcaaagagcccgcttaatccacatgcaagttccggcttgccaccggtcatggcccctg
actgagggactcgggtcgcaggccacatcaccagtggagataagaatactttttgacccc
attaacatggcgcggaccgttgaccgcggcccgtctgccggaccaagcgccgaagaaaag
aaggcgtgcgagaacttccgtaagttctggggtgataaatccgagctcagacgctttgag
cgtgactccatccgggaaacgctcatttggacctcgaccacgcctttcggtatctgcgag
gagatcattcggtacattctcggtcggcacctgcgcattggacacctccatgaggagata
agcgtctatggcgacgggcttcctgccttgttatccctgaagcccgccgacacagcttcg
tttaatgtggccaagaaggcattcggtgcctttgaacgcgatattcgggatctggatgag
ttgcccctccgcgtcagacaggtcgcccccatttgcccggaactccggcaggcgtctgtc
aagactccaacatttggatcgtcaaaatcgggccctcggccactggaatgcgtcatctca
ttcgaggcgtcgggcaaatggcccgacagccttgttgccatccagcggacaaagatcgct
tttctcttgatgatcggcagcctcctagagcgcagcaagcccggcgagctcaagacgcac
gtcgggcttgagaacgccaagtatgaaactgagaatcttgcctttctagacgttatttac
gaatctggaccctcgttccgtcttcggatacacagcgatctggaggagtcgctgctagaa
cgtcaggtcaaggataaaacatcggagcagtaccttagacagcgggccacgacactcctc
gcgacattcaggcggctatacaccaacctacctctgcacaaccaatacatttccacttgc
gccacgcgcttcccggccttgtcaccgacgattcgtctcgtcaaacactggttcaacgtc
cacaagctgtcatgccactttaccgaggagttcatcgaactcgccgttctccacgtcttc
ctctctccatacccttgggatgctccctcgagcatcaacactggtttcatgcgaaccttg
ttattcctttcccattgggattggcgctcagagcccctagtggtcgacacgagcggtgag
atgacggcatcagaaagggcatcgatctcgacccgccttgaagcgtggcgtaagattgac
cccaatatgaaccacaccgttctccttgtagccacctcccaggagccaagcggggtcgcg
tggacgacagcagatggccaggcgaagccatcaaaagtggttgccgcacggatgacgtcc
ctcgctaagagcgcctcccgtttgatcagggagcagggtgtggaactcgaccaccggcgg
ttgtttgtgccttcgcttaaggagtacgatgtcctcatccacctgaacagcaaggcgttc
aagagcacgctaaagacgtatgccaacatcgatcccgaagaggaagaggaagtcgcccgg
cccaaattcaagaatcttgacgagcggactggacaggagccactgcctttggcgcagcat
cctgcggatctgtttttggagcacctcaatgcaacatacggaggaccactcgttttcttc
cgtggtagtgtggaggacaacaccatcggggcgatctggaacccacagatgcaaaggcgg
agtttcaggattaacctgccgacttcctacaagcctgtagcagcagggaagaaacaatcc
aagagcgacgaacacgaagatgatgaggaggcggacttagtagatgtcaacaaagaggcg
atcttatcagagattgcgagaatcggggcggatttggtggaaaagatcgaggtgaaaagt
gcatcataa
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