Thermothelomyces thermophilus: MYCTH_2308663
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Entry
MYCTH_2308663 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MYCTH_2308663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_2308663
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
MYCTH_2308663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
11510952
NCBI-ProteinID:
XP_003665192
JGI:
2308663
UniProt:
G2QK41
LinkDB
All DBs
Position
5:join(2399806..2401258,2401309..2402423)
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AA seq
855 aa
AA seq
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MELDMNYFPEAELIFNRSLMSTPNVNLWTKYLDYIRRRNDLNDSTGNARQTVSRAYEFVI
DNIGLDKDSGKIWAEYIQFLKFGPGTVGGSQWQDQQKMDQLRKAYQRAICVPISNVNTLW
KEYDQFEMGLNKLTGRKYLAEKSASYMSAKSAYTALENITRGLQRTTLPRLPPAPGFDGD
QEYMEQVEIWKKWIAWEKSDPLDLKDDKEQPGLYQKRILYVYNQALMALRFWPEMWVDAA
QWCFDNNITSKDGSPTGLDFLTRGIEANPESVLLALKHADYIESTYPIEETDESKIARGK
AVRAPYDKVLDTLYGIIKRLKEREAAEIARIEEAAKSAGENTTNNKSDDDDEDEDDAGSS
DKAPKNSKVSDQLRAIKQGFAAQTQLLSRTISFVWIALIRAMRRIQGKGKPNTELGGMRQ
AFQDARHRGRLTSDVYAAVAQLEWTIYKDPAGGKIFDRGAKLFPEDENFALENIKYLHSR
DDTTNARVLFETVVNRLTQKPELVHKAKPLYAYFHKYESQFGELSQIAKLEKRMAELFPE
DPKLAHFSARYSTDKFDPIAARIIVSPMTQLRPKQLIPSIEKGASAQDSPRPPPLASRAS
PASHTLPATNSPKRPLPADDFEEPPRKIQRNDFSEFQRGASPLKGAAGRRLDQQRRLQGQ
GAASYAAAPAPIARDITFLLSQIPRADLYDFQRFNPAKMTNLLRDTPVPEYTAWKSMRQS
SEHTGQYGGYQSRDSPAPVGRPHSPYVGGDGGRGRMPPASAVPYRQGSNRPGSSGSYEPP
PAVYAPGHPPLPPQAGYAPPPPVQYDGAAGAAWPPYPPPPAAQQGYGGPPPPHLYGQAPP
PPAQGGYPRYPPHPY
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgacatgaattactttccagaggccgagcttatcttcaataggtcgctcatg
tcaacaccaaatgttaatctgtggaccaagtatctggactacatccgtcggagaaacgac
ctcaatgatagcaccggcaatgctcgccagactgtctcccgcgcctatgaattcgtgatt
gacaacattggcctggacaaggattctggcaagatatgggccgagtacatccagtttctc
aaatttggacccggcacagtcgggggaagccagtggcaagaccagcagaagatggaccag
ctgcgcaaggcgtaccagcgggcgatttgtgtgccgattagcaacgtcaataccctgtgg
aaggaatacgaccagttcgagatggggctcaacaagctgaccggccgcaagtacttggcc
gagaagtcggcatcgtacatgtccgccaagagcgcgtacacggccctcgagaacatcact
cggggcctgcaacgcactactctcccccgcctcccgcccgctcctggctttgacggcgat
caggagtacatggagcaggtcgagatctggaagaagtggatcgcttgggagaagtcggac
cctctcgatctcaaggacgacaaggagcaaccgggtctctaccaaaagcgcattctctat
gtctataaccaggctctcatggctctccggttctggcccgagatgtgggttgatgccgct
caatggtgcttcgacaataacatcacgtccaaggacgggagccccaccggactcgacttc
ctcaccaggggtattgaggcaaaccccgaaagtgttctgctcgctctgaagcatgccgac
tacatcgagtctacctatccaatcgaggagaccgacgagtcaaagattgctcgcggcaag
gccgttcgcgctccctacgacaaagtcttggacacgctctatggcatcatcaagcgcctc
aaggaacgcgaggccgcggaaattgcccgcatcgaagaggctgccaagtcggctggcgaa
aacaccaccaacaacaagtctgacgacgatgacgaggatgaggatgacgccggatcctcg
gacaaggccccgaagaatagcaaggtaagcgaccaacttcgagctatcaagcaggggttc
gctgcgcagactcagctgctctcacggaccatctcctttgtctggatcgccttgattcgc
gcgatgcgccgtatccagggcaagggaaagcccaacacggagctcggcggcatgcggcag
gctttccaagatgcgcgccatcgtggccgtcttaccagcgacgtatatgctgcagttgcc
caactggagtggaccatctacaaggacccggcgggaggcaaaatctttgaccgaggtgcc
aaactgtttcccgaagatgagaatttcgcattggagaacatcaagtacctccattcccgt
gatgacaccaccaatgctcgcgtgctgttcgaaactgtcgtcaaccgcctgacccagaag
cctgagcttgtgcataaggctaaacctctctatgcctactttcacaagtatgaatcgcag
ttcggagagctgtctcagatcgcgaagttggagaagcgcatggcagagctcttccccgag
gacccgaagctggctcacttcagtgcgcggtattcgaccgacaagttcgacccgatcgcc
gctaggatcattgtgtcgcccatgacgcaactcaggcccaaacagttgataccttcgatc
gagaaaggcgcctccgctcaggactcccctcgtccaccgcctctcgcgtcgcgcgcgagt
cccgcgtctcacacattacctgcgacaaattccccaaagcgacctttgcccgctgacgat
ttcgaagagcccccacgcaagattcagcgcaacgatttcagcgagttccagcgcggcgcg
tcgccgcttaaaggtgctgccggccgccgcctggaccagcagcgccgtctgcagggccaa
ggcgctgcctcatatgccgctgcgccagctccgattgctcgggacatcaccttcctcctg
agccagatccctcgggcggacctctacgactttcaacgcttcaaccctgcaaagatgacc
aacctcctgcgagacactccggtccccgagtatacggcttggaagagcatgcgtcaatcg
tcggagcataccggtcagtatggtggctaccagagccgcgactcgcctgctcccgtcggt
cgacctcatagcccctacgtcggaggagacggaggccgcgggcgcatgccgcccgcgtcc
gccgtcccctacagacagggctctaaccgacccgggtctagcggttcatacgaaccacca
ccagctgtatacgctccaggccaccctccccttccccctcaggcagggtatgcgcctccg
ccacccgttcaatacgatggtgcagccggggctgcttggccgccttacccgcctccgcct
gccgcgcaacagggttatggtggtcctccgccgcctcacttgtacggccaagctccgccg
cccccagctcagggaggttatccgcggtatccgcctcatccttactag
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