Thermothelomyces thermophilus: MYCTH_2309927
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Entry
MYCTH_2309927 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MYCTH_2309927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtm03009
]
MYCTH_2309927
Ribosome biogenesis [BR:
mtm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MYCTH_2309927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Cytochrom_D1
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
DUF7165
Motif
Other DBs
NCBI-GeneID:
11513658
NCBI-ProteinID:
XP_003665833
JGI:
2309927
UniProt:
G2QKV6
LinkDB
All DBs
Position
6:complement(join(616194..616534,616697..619436,619516..619626))
Genome browser
AA seq
1063 aa
AA seq
DB search
MPHLEPDGPLTKRQRTDAVVKARKTAKRGSAIFAPFRTIGLVSPTAVPFTSIPLGKTTFQ
VTTSVGRALQTYDLKRGLNLVFVTRPQTPADITATYAWKEKVFAAWGDPRSGEPQGLWAF
QRGKKAAELQLPADLDQPIKQILIFGSWIVACALTRIEVWKSSTLEHYTTIFTAAAKKGA
NEITGGVCNMPTFLNKIFVGRKDGWVEIWNISTAKLIYTILPPSPDCGAVTCLQPSPALS
LLAIAYSEGPLVIQNVLTDKPVLQLNAGTEDAPVTCISFRTDGQGAGQDGRKDGVMATAT
GVSGDVTFWDLNKGGRIMGVLRSAHNPPSYNRDVRGGISKVEFLPGQPVIVTSGLDNSLK
SWIFDESPFSPVPRILHMRSGHAAPVRCLQFLPSDFDGAEGGNKWLLSGGRDRSLWGWSL
RRDGQSAELSQGALRKKARKVGILAGSSLSHGPTTTLDDLKAPEITCIASSLNRDGGMGA
MPGKQVIWDKGNDKTKLSSAELSGMTGWESVVTAHKDDPWARTWFWGRRRAGRWAFKTGD
GEAVSTVAISPCGSFALVGSSGGSIDMFNLQSGRHRQRFPSRLTPAQLRQLKMQQLKALD
EVNKLQSRARKTFAPGTGRHTKAVTGIVVDSLNRAVISCSLDGKIKFWDFVTGNLVDEID
WAPMIKITACRYHAGNDLVAFACDDHSIRVVDIETKQTIRELWGCRGDITDFCFSNDGRW
IVAASRDSIIRVWDLPTSHLIDAFRLEKPCTALAFSATGEYLAGAVEGDLGVQLWTNRTL
FKHVPTRQISDKEIGQIAGPTASGEGGQGLIEAAFEGGGEGGAAEEEEEEGEQDDGVTAP
TIDQLSADMVTLSLVPKSRWQTLLHIDLIKARNKPKEPPKAPEKAPFFLPSVGAAAGASA
SGLAAGSLVPLADEAKKQAEAQGSRLTRLDRMRNQQALTSKLLACGASGDYTDFLEHLKS
LGPSAADLELRSLSVGDGSDETNELLHFIRALTSRLKSRRDYELTQAWMTVFLRLHFDLV
MANESLLRALAEWKQYQTKERERLDDLVGYCGGVVGFLRSPRT
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatttggagcctgatgggccgttaaccaagcgccagaggaccgatgccgtcgtc
aaggcgcgcaaaacggccaaacgaggctcggccattttcgccccgttccgaaccatcggc
ctagtctctcccactgccgtccccttcacgtccattcccctcggcaagaccacctttcag
gtcacaacgtcggtcggtcgcgccctgcagacatacgacctcaagcgcggcctcaacctt
gtcttcgtgacccgccctcaaacgcctgccgacatcaccgccacctatgcctggaaggag
aaggttttcgccgcttggggcgaccctcgctccggcgagccccaggggctgtgggccttt
cagcgcggcaagaaggcggccgaactccagctccccgccgacttggatcagccgatcaag
cagattctcatcttcggctcgtggattgtcgcctgcgccctgaccaggatcgaggtgtgg
aagtcgtccacactggagcattacaccaccatcttcaccgccgcggccaagaagggtgcc
aacgagatcacgggcggcgtgtgcaacatgcccacgttcctgaacaagatctttgtcggc
cgaaaagacggttgggtggagatatggaacatcagcaccgccaagctgatctacaccatc
ctcccgccaagtcccgactgcggcgccgtcacatgcctccagccttccccagccttgtcc
ctgctggccatcgcctactcggagggcccgctggtgatccagaacgtgctcaccgacaag
ccggtactccagctgaatgcggggaccgaggacgcgccggttacgtgcatctcgttccga
accgacggccagggagccggccaggatgggcgaaaggacggcgtcatggctaccgcaacc
ggcgttagcggggatgttaccttctgggacctcaacaagggagggaggatcatgggagtt
ctccggagcgcgcacaaccccccctcgtacaacagggacgtccgtgggggcatcagcaag
gtcgagtttctccctgggcagcccgtcatcgtcaccagcggcctggacaactcgctcaag
tcgtggatctttgacgagtcgcccttctcgcccgttccgcggatcctacacatgcgcagc
ggccatgcggccccggtccgttgcctgcagttcctgccgtcggattttgacggtgccgag
ggcggcaacaagtggctcctgagcggcgggcgcgacaggagcctgtggggttggagtctg
cgccgcgacgggcagagcgccgagctcagccagggcgccctccgcaagaaggccaggaag
gtcggcatcctggccggcagctcgctctcccacggcccaaccaccaccctggacgacctc
aaggctcccgagatcacctgcatcgcctcgtcgctcaaccgtgacggcgggatgggcgcc
atgccggggaagcaggtgatctgggacaagggtaacgacaagaccaagctctcgagcgcc
gagctcagcggcatgaccgggtgggagagcgtcgtgacggcccacaaggacgatccgtgg
gcacgcacctggttctggggcaggagacgggccggtcggtgggccttcaagacgggcgac
ggggaggccgtgtcgaccgtcgctatcagcccgtgcggcagcttcgcgctggtcggctcg
agcggaggcagcatcgacatgttcaacctgcagtcgggaaggcacaggcagcgtttcccc
tcgaggctgacaccggcgcagctccgacagctgaagatgcagcagctgaaggcgctggac
gaggtcaacaagctgcagtcgcgggcccggaagacgttcgccccgggcacgggaaggcac
accaaggcggtgacgggcatcgtggtcgactcgctcaaccgggccgtcatctcgtgctcg
ctcgacggcaagatcaagttctgggacttcgtgacgggtaacctggtagacgagatcgac
tgggcgccgatgatcaagatcacggcctgccggtaccacgcgggtaacgacctcgtagcg
ttcgcctgcgacgaccactccatcagggtggtcgatatcgagacgaaacagaccatccgc
gagctctggggctgccgcggcgacatcaccgacttctgcttctccaacgacggccgctgg
atcgtcgccgcgtcgcgggactccatcatccgcgtctgggacctgcccaccagccacctg
atcgacgccttccggctggaaaagccctgcacggcgctggccttctcggccacgggcgag
tacctcgccggcgccgtcgagggcgacctcggggtgcagctgtggaccaaccgcaccctc
ttcaagcacgtgccgacgaggcagatctcggacaaggagatcggccagatcgccggcccg
accgcgtcgggcgagggcggccagggcctgatcgaggcggcgttcgagggcggcggggaa
ggtggggcggcggaggaggaggaggaggagggggagcaggacgacggcgtgacggcgccg
acgatcgaccagctcagcgccgacatggtgacgctcagcctggtgcccaagagccgctgg
cagaccctcctgcacatcgacctgatcaaggcgcgtaacaagcccaaggagccccccaag
gcgcccgagaaggcgcccttcttcctgccgtcggtgggcgctgccgccggcgccagcgcc
agcggcctggcggccggctcgctggtgccgctggcggacgaggccaagaagcaggccgag
gcccagggctcgaggctgacgcggctggatcggatgcggaaccagcaggcgctcacgtcc
aagctgctcgcttgtggcgcgtcaggggactacacggatttcctcgaacatctcaagtcc
ctcgggccgtcggcggccgacctcgaactgcgctcgctctcggtgggcgacggcagcgac
gagaccaacgagctgctgcatttcattcgggcgctgacgagccggctcaagtcgaggcgc
gactacgagctgacgcaggcctggatgacggtgttcctgcggctgcacttcgacctggtc
atggccaacgagtccctgctacgggccctggccgagtggaagcagtatcagaccaaggaa
cgggagcggttggatgacctggtcgggtactgtggcggagttgtcgggtttttgaggagt
ccgcggacctag
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