Thermothelomyces thermophilus: MYCTH_2312447
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Entry
MYCTH_2312447 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MYCTH_2312447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtm03021
]
MYCTH_2312447
Enzymes [BR:
mtm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MYCTH_2312447
Transcription machinery [BR:
mtm03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
MYCTH_2312447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
bDLD2
Motif
Other DBs
NCBI-GeneID:
11509474
NCBI-ProteinID:
XP_003667079
JGI:
2312447
UniProt:
G2QQH1
LinkDB
All DBs
Position
7:join(2427716..2427897,2428002..2432744,2432891..2432964,2433064..2433230)
Genome browser
AA seq
1721 aa
AA seq
DB search
MNIAQPVGSALESVEFTFLSPDEIRSISVKRIENDSTFDNLLNPIPGGLYDPALGSWGDS
LCRTCNLNQAQCPGHPGHIELPVPVYHPVFMDQAYRLLRAQCVYCHKFRLPRHEIHKYTC
MLRLLQVGLVHEANMIESFSASDLGEQLRKLRLSDVPTVEADEAEEEGNNLHDSTMRARE
TYVRQVLREHRLKVNVGDIRKGKHEGAAEMRRALVKEFLAQIVKEKRCRSCDGISPVYRK
DRWVKIFERDLSEKERAAMAQAGRTRVDALALSRKAKKHHDLNPDEGIADVDSSSEGSSG
ERDSEGEGEGEELDENGDVVMTDAAVKTRRSKSKAAKPAQRYLSTMEVHKRLELLFEKEQ
EILSLLYNSKPRPRNSKPLTADMFFITALLVPPNRYRPEARMGDSQISEAQQNNLYKMIL
RSASNVAQISREISSQTKETAADEGRRTRDMSSLYQAWTELQDAVNSLIDRDKNPIQGAA
AKRNEEGIKQKLEKKEGLFRKNMMGKRVNFAARSVISPDPNIETNEIGVPPVFAKKLTYP
EPVTSHNFKDLQQAVINGVDKWPGASAIENENGQIINLRTKSLEDRIALANQLLAPTGNN
FSGQRNKKVHRHLTNGDVVLMNRQPTLHKPSIMGHRVRVLPGEKTIRMHYANCNTYNADF
DGDEMNMHFPQNELARVEALQLADTDHQYVSGTAGNPLRGLIQDHLSVSVELCSKDVFLD
QGAYHQLIYSALRPESGHITGERIELVPPAVIKPVSRWTGKQVITTILKNIRPADCGNLW
MNGSAKIKSRSWGEDSEEGQVMFRDGEFISGILDKSQLGPSSGGFVHAVHEIYGPSVAGK
LLSSMGRLLTRYLAMIAFTCGMDDLRMTPQGEKDRRETIRAAADIGLRVAAKYVSLEEQK
PTKDDPLLLERLEEVLRDDKKQEGLELLTSHALADLSSEITRLCLPAGLEKQFPKNHMQS
MTTSGAKGSPVNANLISCNLGQQVLEGRRVPVMVSGKTLPSFKPFDTDVRAGGYIVNRFL
TGIRPQEYYFHHMAGREGLIDTAVKTSRSGYLQRCLIKGMEGLRVSYDSSVRDSDGSVVQ
FLFGEDGIDISKQKYLNDFEFVLRNLDSQLPQIRYHEPGTQALFEHKDEVMKRMKSAIRS
SNTRNPLDPVTAELDPSAFAFATSEKFYTKMMDYVKTNKDGLIKDKKGPEKQQGLIARKT
AEKILAAKYIRSLVEPGEAVGIVAGQSVGEPSTQMTLNTFHLAGHSARNVTLGIPRLREI
LMTASTKPSTPSMTLVLNEELSEQDGERFAKSISVLPLAHVTKEAVVREHVGRGIGYALA
KSFEIRLRFFKADEYIKMYAITIADVLNTVERKFIPLLSALTRKEIKKKQKQNSAATPEI
GVKSGVVEMAAPNPERERGPGGDDDDDDEEGEEDATSAKQRANRSEAVSYGPNDEEDDAI
QQQLQRETDDAEEGEEQLEFVDEAYGGSPEPEDGLGDGKTDEGRSRSREARIKNKNEHVA
RFRCDEVGGEWVDFTLEFDASIPKILMLSLVQEAVKKSLIQQIDRIGTATFEPKKVKDAV
TGEERTELLVHTEGANLRAMQQYGDYINPNRISTNDIAQVLEVYGVEACRSNIVQELSAV
FSGHGIAVDPRHLNLIADYMTRAGGFTAFNRIGLTSNVSPFTKMSYETTVGFLKDAVLEG
DWDCLATPSSRLVAGKLGTLGTGSFDVLTKVPTEHKAAVAF
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgcacaacccgtggggtcggcgctcgaaagcgtcgaattcacctttctttct
cccgacgagatccggtccatttccgtcaagcggatcgagaatgacagcaccttcgacaat
cttctcaacccgatacccggcggtctctacgaccccgccctggggtcatggggcgattcc
ttatgccggacatgcaatctgaaccaggcccaatgcccgggccatccgggtcacatcgag
ctccccgtaccggtctatcaccccgtcttcatggaccaggcgtaccgcttgctccgcgcc
cagtgcgtctactgccacaaattccgactgccgcgtcacgaaatccacaagtacacttgc
atgctccggctattgcaggttggccttgtccacgaggcgaacatgattgagtcgttttcc
gccagcgacctgggagagcagctcaggaagctgaggttatccgatgttcctacggtcgag
gcggacgaggcggaagaggaggggaacaacctgcatgacagcaccatgcgcgccagggag
acgtatgtgcggcaggtcctgcgggagcataggctcaaggtcaacgttggcgacatcagg
aagggcaagcatgagggcgcggccgagatgaggcgggcgctggtgaaggagttcctcgcc
cagattgtcaaggagaagcggtgcaggagttgcgacggcatttcgcccgtctatcgcaag
gaccgttgggtcaagatctttgagcgcgacctgagcgagaaggaaagggcagctatggca
caagctgggaggacgcgggtcgacgcgcttgccctgagccgaaaggccaagaaacaccac
gatcttaatcctgacgagggtatcgccgacgtcgactcatcttctgaggggtcgtccgga
gagcgcgacagcgagggcgagggcgagggcgaggagctcgacgaaaacggggatgttgtc
atgaccgacgccgccgtaaagacgcgacggagcaagtcgaaagcggcgaaaccggctcag
cggtacctcagcactatggaagttcacaagcgcctcgagctgctcttcgagaaagagcag
gaaatcctatccctcctctacaactcgaagccccgaccgagaaactccaaaccgctcaca
gccgacatgttcttcattaccgccctcttggttccccccaaccgttatcgcccagaagct
cgcatgggggattcgcagatctccgaagctcagcagaacaacctctacaagatgatccta
aggagcgcttccaacgtggcgcagatctcgcgggagatcagcagccaaaccaaagagaca
gccgcggacgagggcaggaggaccagggacatgagctcgctgtaccaggcgtggacggaa
ctgcaagacgccgtcaactccctgatagaccgtgacaagaacccgattcagggtgccgcc
gccaagcgaaacgaagaggggatcaagcagaagctcgagaagaaagagggcctgttccgg
aaaaacatgatgggcaagcgtgtcaacttcgctgccaggagtgtcatctctcccgatccc
aatattgaaaccaacgagatcggagtgcctcccgtttttgccaagaaactcacgtatccc
gagccggtgacgagtcataacttcaaggatcttcagcaggcagtcatcaacggtgtcgac
aagtggcctggtgcctcggccatcgagaacgagaacggccagatcatcaacctgcgcacc
aagtcactagaagaccgtattgcgctggcgaatcaacttctcgccccgaccgggaacaac
ttcagcggccagcgcaataagaaggtacatcggcatttgaccaacggtgacgtggtcttg
atgaaccggcaaccgacgcttcacaagccctccatcatgggccaccgtgtccgcgtcctg
ccgggagagaagacgatccgcatgcactacgccaactgcaacacgtacaacgccgacttt
gacggcgacgagatgaacatgcactttccgcagaacgagctcgcgcgcgtggaggccctg
cagttggccgataccgatcaccaatacgtctcgggaacagccgggaacccccttcgtggt
ttgatccaggaccacttgtcagtgtcggtggagttgtgcagcaaggacgtcttcctcgac
cagggggcctaccatcagctcatctacagcgcactccgaccagagagcggacacatcacg
ggcgagaggatcgagctcgtacctccagccgtcatcaagcccgtttcccgctggacgggg
aagcaggtcatcaccaccatcctgaagaacatcaggccggccgattgtgggaatctgtgg
atgaacggttctgctaagatcaagagccgtagctggggcgaggactccgaggagggccag
gtgatgtttcgggatggcgagttcatcagcggcatccttgacaagtcacagctgggccca
agcagcggcggcttcgtccacgccgtccacgaaatctacggcccgtcagtcgcggggaaa
ctgctcagcagcatgggtcggctactgacccgatacctggccatgatcgccttcacatgc
ggtatggacgaccttcgcatgacgccgcagggcgagaaggaccgcagggagacgatcagg
gccgctgcagatatcggtctccgagtggcggccaagtacgtgtcgctcgaggagcagaag
ccgaccaaggacgatcctctcctcctggagcgtctcgaggaggtcctccgagacgacaag
aagcaggaaggcctggagttgctgaccagccacgcgctagccgatctctcgtccgagatc
accaggctctgcctgcccgccggtctcgagaagcagttccccaagaatcacatgcagtcg
atgacgacttccggtgccaagggcagtcccgtcaacgccaacctcatctcgtgcaacctg
ggtcagcaggtactcgaaggccgccgcgtccccgtcatggtcagcggcaagaccttgccc
agcttcaagccattcgacaccgatgtgagggcaggcggttatattgtcaatcgtttcttg
acgggcattcgcccgcaggagtactacttccatcacatggccggtcgcgagggtctgatc
gatacggccgtcaagacgtcccgttccggttacctccagaggtgtctgatcaagggcatg
gaaggtctaagggtctcgtacgattcgtcggtccgagactcggatggctcggtcgtgcag
ttcctgttcggcgaggacggcatcgacatctcgaagcagaaataccttaacgacttcgag
ttcgtcctgcgcaatctcgactcgcagctgccacagatcaggtaccacgagcccggaacc
caggccttgttcgagcacaaggacgaggtcatgaagcggatgaagagcgccatccggtcc
agcaacacccgcaacccccttgacccggtgacggcagagctcgaccctagcgccttcgct
ttcgccacgtcggagaagttctacaccaagatgatggactatgtcaagaccaacaaggac
ggcctgatcaaggataagaagggcccggagaagcaacagggcctgatcgcccgcaagacc
gccgagaagatcttggcagccaagtacatccggtccctggtcgaacctggcgaggccgtc
ggcatcgtggctgggcagtctgtcggagagccgtcaacccagatgacgctgaacacattc
catctggcaggtcactcggctaggaacgtgaccctgggtatcccgcgtctccgcgaaatc
ctgatgacggccagcaccaagccgtcgacgccgtcgatgactcttgtcctgaacgaggaa
ctctcggagcaggacggagagcggttcgcaaagtccatcagcgtgctcccgctggcccac
gtcaccaaggaggcggtggtccgcgagcacgtcgggcgcggtatcggatacgccctggcc
aagtcgttcgagatccggctgcgtttcttcaaggcggacgagtacatcaagatgtatgct
atcaccatcgcagacgtgctcaacacggtggagcgcaagttcatcccgctcctttccgcc
ctcacgaggaaggagatcaagaagaagcaaaagcagaacagcgccgccacgcccgagatc
ggcgtcaagtccggcgtggtggagatggcggcacccaacccggaacgggagagggggccg
ggcggcgacgacgatgacgacgacgaggagggtgaagaggatgccacgagcgccaagcag
cgagccaaccggtccgaggcggtctcgtacgggccgaatgacgaggaggacgacgcgatc
cagcagcagctccagcgcgagacggacgacgccgaagagggcgaggagcagctcgagttc
gtggacgaggcgtacggcggcagtccggaaccggaggacgggctgggcgacggcaagacg
gacgaggggcggtcgcggtcacgcgaggcgcgcatcaagaacaagaacgagcacgtggcg
cggttccggtgtgacgaggtgggcggcgagtgggtcgacttcacgctcgagttcgacgcg
tccattcccaagatcctgatgcttagcctggtgcaggaggcggtcaagaagtcgctgatc
cagcagatcgaccggatcggcaccgccacgttcgagcccaagaaggtgaaggacgccgtc
acgggcgaggagcgcaccgagctgctggtgcacaccgagggcgccaacctgcgggccatg
cagcagtacggcgactacatcaaccccaacaggatatcgaccaacgacatcgcccaggtg
ctggaggtgtacggtgtcgaggcttgccggagcaatatcgtccaggagctcagcgccgtg
ttcagcggccacggtatcgcggtcgacccgcggcatctgaacctcattgccgactacatg
actagggccggcggctttacggcgttcaaccggatcggcttgacgagcaacgtcagccca
ttcaccaagatgagctacgaaaccacggtcgggttcctcaaggatgcggtcctggagggt
gactgggactgcctggcgacgccgtctagcaggctggttgctggcaagttgggcacgctg
ggcaccggctcgtttgatgttctcaccaaggtgccgacggagcacaaagctgccgtggca
ttctaa
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integrated database retrieval system