KEGG   Thermothelomyces thermophilus: MYCTH_2312447
Entry
MYCTH_2312447     CDS       T02231                                 
Name
(RefSeq) hypothetical protein
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
mtm  Thermothelomyces thermophilus
Pathway
mtm03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mtm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MYCTH_2312447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mtm03021]
    MYCTH_2312447
Enzymes [BR:mtm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MYCTH_2312447
Transcription machinery [BR:mtm03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     MYCTH_2312447
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 bDLD2
Other DBs
NCBI-GeneID: 11509474
NCBI-ProteinID: XP_003667079
JGI: 2312447
UniProt: G2QQH1
LinkDB
Position
7:join(2427716..2427897,2428002..2432744,2432891..2432964,2433064..2433230)
AA seq 1721 aa
MNIAQPVGSALESVEFTFLSPDEIRSISVKRIENDSTFDNLLNPIPGGLYDPALGSWGDS
LCRTCNLNQAQCPGHPGHIELPVPVYHPVFMDQAYRLLRAQCVYCHKFRLPRHEIHKYTC
MLRLLQVGLVHEANMIESFSASDLGEQLRKLRLSDVPTVEADEAEEEGNNLHDSTMRARE
TYVRQVLREHRLKVNVGDIRKGKHEGAAEMRRALVKEFLAQIVKEKRCRSCDGISPVYRK
DRWVKIFERDLSEKERAAMAQAGRTRVDALALSRKAKKHHDLNPDEGIADVDSSSEGSSG
ERDSEGEGEGEELDENGDVVMTDAAVKTRRSKSKAAKPAQRYLSTMEVHKRLELLFEKEQ
EILSLLYNSKPRPRNSKPLTADMFFITALLVPPNRYRPEARMGDSQISEAQQNNLYKMIL
RSASNVAQISREISSQTKETAADEGRRTRDMSSLYQAWTELQDAVNSLIDRDKNPIQGAA
AKRNEEGIKQKLEKKEGLFRKNMMGKRVNFAARSVISPDPNIETNEIGVPPVFAKKLTYP
EPVTSHNFKDLQQAVINGVDKWPGASAIENENGQIINLRTKSLEDRIALANQLLAPTGNN
FSGQRNKKVHRHLTNGDVVLMNRQPTLHKPSIMGHRVRVLPGEKTIRMHYANCNTYNADF
DGDEMNMHFPQNELARVEALQLADTDHQYVSGTAGNPLRGLIQDHLSVSVELCSKDVFLD
QGAYHQLIYSALRPESGHITGERIELVPPAVIKPVSRWTGKQVITTILKNIRPADCGNLW
MNGSAKIKSRSWGEDSEEGQVMFRDGEFISGILDKSQLGPSSGGFVHAVHEIYGPSVAGK
LLSSMGRLLTRYLAMIAFTCGMDDLRMTPQGEKDRRETIRAAADIGLRVAAKYVSLEEQK
PTKDDPLLLERLEEVLRDDKKQEGLELLTSHALADLSSEITRLCLPAGLEKQFPKNHMQS
MTTSGAKGSPVNANLISCNLGQQVLEGRRVPVMVSGKTLPSFKPFDTDVRAGGYIVNRFL
TGIRPQEYYFHHMAGREGLIDTAVKTSRSGYLQRCLIKGMEGLRVSYDSSVRDSDGSVVQ
FLFGEDGIDISKQKYLNDFEFVLRNLDSQLPQIRYHEPGTQALFEHKDEVMKRMKSAIRS
SNTRNPLDPVTAELDPSAFAFATSEKFYTKMMDYVKTNKDGLIKDKKGPEKQQGLIARKT
AEKILAAKYIRSLVEPGEAVGIVAGQSVGEPSTQMTLNTFHLAGHSARNVTLGIPRLREI
LMTASTKPSTPSMTLVLNEELSEQDGERFAKSISVLPLAHVTKEAVVREHVGRGIGYALA
KSFEIRLRFFKADEYIKMYAITIADVLNTVERKFIPLLSALTRKEIKKKQKQNSAATPEI
GVKSGVVEMAAPNPERERGPGGDDDDDDEEGEEDATSAKQRANRSEAVSYGPNDEEDDAI
QQQLQRETDDAEEGEEQLEFVDEAYGGSPEPEDGLGDGKTDEGRSRSREARIKNKNEHVA
RFRCDEVGGEWVDFTLEFDASIPKILMLSLVQEAVKKSLIQQIDRIGTATFEPKKVKDAV
TGEERTELLVHTEGANLRAMQQYGDYINPNRISTNDIAQVLEVYGVEACRSNIVQELSAV
FSGHGIAVDPRHLNLIADYMTRAGGFTAFNRIGLTSNVSPFTKMSYETTVGFLKDAVLEG
DWDCLATPSSRLVAGKLGTLGTGSFDVLTKVPTEHKAAVAF
NT seq 5166 nt   +upstreamnt  +downstreamnt
atgaatatcgcacaacccgtggggtcggcgctcgaaagcgtcgaattcacctttctttct
cccgacgagatccggtccatttccgtcaagcggatcgagaatgacagcaccttcgacaat
cttctcaacccgatacccggcggtctctacgaccccgccctggggtcatggggcgattcc
ttatgccggacatgcaatctgaaccaggcccaatgcccgggccatccgggtcacatcgag
ctccccgtaccggtctatcaccccgtcttcatggaccaggcgtaccgcttgctccgcgcc
cagtgcgtctactgccacaaattccgactgccgcgtcacgaaatccacaagtacacttgc
atgctccggctattgcaggttggccttgtccacgaggcgaacatgattgagtcgttttcc
gccagcgacctgggagagcagctcaggaagctgaggttatccgatgttcctacggtcgag
gcggacgaggcggaagaggaggggaacaacctgcatgacagcaccatgcgcgccagggag
acgtatgtgcggcaggtcctgcgggagcataggctcaaggtcaacgttggcgacatcagg
aagggcaagcatgagggcgcggccgagatgaggcgggcgctggtgaaggagttcctcgcc
cagattgtcaaggagaagcggtgcaggagttgcgacggcatttcgcccgtctatcgcaag
gaccgttgggtcaagatctttgagcgcgacctgagcgagaaggaaagggcagctatggca
caagctgggaggacgcgggtcgacgcgcttgccctgagccgaaaggccaagaaacaccac
gatcttaatcctgacgagggtatcgccgacgtcgactcatcttctgaggggtcgtccgga
gagcgcgacagcgagggcgagggcgagggcgaggagctcgacgaaaacggggatgttgtc
atgaccgacgccgccgtaaagacgcgacggagcaagtcgaaagcggcgaaaccggctcag
cggtacctcagcactatggaagttcacaagcgcctcgagctgctcttcgagaaagagcag
gaaatcctatccctcctctacaactcgaagccccgaccgagaaactccaaaccgctcaca
gccgacatgttcttcattaccgccctcttggttccccccaaccgttatcgcccagaagct
cgcatgggggattcgcagatctccgaagctcagcagaacaacctctacaagatgatccta
aggagcgcttccaacgtggcgcagatctcgcgggagatcagcagccaaaccaaagagaca
gccgcggacgagggcaggaggaccagggacatgagctcgctgtaccaggcgtggacggaa
ctgcaagacgccgtcaactccctgatagaccgtgacaagaacccgattcagggtgccgcc
gccaagcgaaacgaagaggggatcaagcagaagctcgagaagaaagagggcctgttccgg
aaaaacatgatgggcaagcgtgtcaacttcgctgccaggagtgtcatctctcccgatccc
aatattgaaaccaacgagatcggagtgcctcccgtttttgccaagaaactcacgtatccc
gagccggtgacgagtcataacttcaaggatcttcagcaggcagtcatcaacggtgtcgac
aagtggcctggtgcctcggccatcgagaacgagaacggccagatcatcaacctgcgcacc
aagtcactagaagaccgtattgcgctggcgaatcaacttctcgccccgaccgggaacaac
ttcagcggccagcgcaataagaaggtacatcggcatttgaccaacggtgacgtggtcttg
atgaaccggcaaccgacgcttcacaagccctccatcatgggccaccgtgtccgcgtcctg
ccgggagagaagacgatccgcatgcactacgccaactgcaacacgtacaacgccgacttt
gacggcgacgagatgaacatgcactttccgcagaacgagctcgcgcgcgtggaggccctg
cagttggccgataccgatcaccaatacgtctcgggaacagccgggaacccccttcgtggt
ttgatccaggaccacttgtcagtgtcggtggagttgtgcagcaaggacgtcttcctcgac
cagggggcctaccatcagctcatctacagcgcactccgaccagagagcggacacatcacg
ggcgagaggatcgagctcgtacctccagccgtcatcaagcccgtttcccgctggacgggg
aagcaggtcatcaccaccatcctgaagaacatcaggccggccgattgtgggaatctgtgg
atgaacggttctgctaagatcaagagccgtagctggggcgaggactccgaggagggccag
gtgatgtttcgggatggcgagttcatcagcggcatccttgacaagtcacagctgggccca
agcagcggcggcttcgtccacgccgtccacgaaatctacggcccgtcagtcgcggggaaa
ctgctcagcagcatgggtcggctactgacccgatacctggccatgatcgccttcacatgc
ggtatggacgaccttcgcatgacgccgcagggcgagaaggaccgcagggagacgatcagg
gccgctgcagatatcggtctccgagtggcggccaagtacgtgtcgctcgaggagcagaag
ccgaccaaggacgatcctctcctcctggagcgtctcgaggaggtcctccgagacgacaag
aagcaggaaggcctggagttgctgaccagccacgcgctagccgatctctcgtccgagatc
accaggctctgcctgcccgccggtctcgagaagcagttccccaagaatcacatgcagtcg
atgacgacttccggtgccaagggcagtcccgtcaacgccaacctcatctcgtgcaacctg
ggtcagcaggtactcgaaggccgccgcgtccccgtcatggtcagcggcaagaccttgccc
agcttcaagccattcgacaccgatgtgagggcaggcggttatattgtcaatcgtttcttg
acgggcattcgcccgcaggagtactacttccatcacatggccggtcgcgagggtctgatc
gatacggccgtcaagacgtcccgttccggttacctccagaggtgtctgatcaagggcatg
gaaggtctaagggtctcgtacgattcgtcggtccgagactcggatggctcggtcgtgcag
ttcctgttcggcgaggacggcatcgacatctcgaagcagaaataccttaacgacttcgag
ttcgtcctgcgcaatctcgactcgcagctgccacagatcaggtaccacgagcccggaacc
caggccttgttcgagcacaaggacgaggtcatgaagcggatgaagagcgccatccggtcc
agcaacacccgcaacccccttgacccggtgacggcagagctcgaccctagcgccttcgct
ttcgccacgtcggagaagttctacaccaagatgatggactatgtcaagaccaacaaggac
ggcctgatcaaggataagaagggcccggagaagcaacagggcctgatcgcccgcaagacc
gccgagaagatcttggcagccaagtacatccggtccctggtcgaacctggcgaggccgtc
ggcatcgtggctgggcagtctgtcggagagccgtcaacccagatgacgctgaacacattc
catctggcaggtcactcggctaggaacgtgaccctgggtatcccgcgtctccgcgaaatc
ctgatgacggccagcaccaagccgtcgacgccgtcgatgactcttgtcctgaacgaggaa
ctctcggagcaggacggagagcggttcgcaaagtccatcagcgtgctcccgctggcccac
gtcaccaaggaggcggtggtccgcgagcacgtcgggcgcggtatcggatacgccctggcc
aagtcgttcgagatccggctgcgtttcttcaaggcggacgagtacatcaagatgtatgct
atcaccatcgcagacgtgctcaacacggtggagcgcaagttcatcccgctcctttccgcc
ctcacgaggaaggagatcaagaagaagcaaaagcagaacagcgccgccacgcccgagatc
ggcgtcaagtccggcgtggtggagatggcggcacccaacccggaacgggagagggggccg
ggcggcgacgacgatgacgacgacgaggagggtgaagaggatgccacgagcgccaagcag
cgagccaaccggtccgaggcggtctcgtacgggccgaatgacgaggaggacgacgcgatc
cagcagcagctccagcgcgagacggacgacgccgaagagggcgaggagcagctcgagttc
gtggacgaggcgtacggcggcagtccggaaccggaggacgggctgggcgacggcaagacg
gacgaggggcggtcgcggtcacgcgaggcgcgcatcaagaacaagaacgagcacgtggcg
cggttccggtgtgacgaggtgggcggcgagtgggtcgacttcacgctcgagttcgacgcg
tccattcccaagatcctgatgcttagcctggtgcaggaggcggtcaagaagtcgctgatc
cagcagatcgaccggatcggcaccgccacgttcgagcccaagaaggtgaaggacgccgtc
acgggcgaggagcgcaccgagctgctggtgcacaccgagggcgccaacctgcgggccatg
cagcagtacggcgactacatcaaccccaacaggatatcgaccaacgacatcgcccaggtg
ctggaggtgtacggtgtcgaggcttgccggagcaatatcgtccaggagctcagcgccgtg
ttcagcggccacggtatcgcggtcgacccgcggcatctgaacctcattgccgactacatg
actagggccggcggctttacggcgttcaaccggatcggcttgacgagcaacgtcagccca
ttcaccaagatgagctacgaaaccacggtcgggttcctcaaggatgcggtcctggagggt
gactgggactgcctggcgacgccgtctagcaggctggttgctggcaagttgggcacgctg
ggcaccggctcgtttgatgttctcaccaaggtgccgacggagcacaaagctgccgtggca
ttctaa

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