Thermothelomyces thermophilus: MYCTH_49818
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Entry
MYCTH_49818 CDS
T02231
Name
(RefSeq) hypothetical protein
KO
K15542
polyadenylation factor subunit 2
Organism
mtm
Thermothelomyces thermophilus
Pathway
mtm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MYCTH_49818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtm03019
]
MYCTH_49818
Messenger RNA biogenesis [BR:
mtm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
MYCTH_49818
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
DSE1_N
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
Beta-prop_NOL10_N
ASA1
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
CFAP251_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR11_2nd
Beta-prop_ACSF4
Nucleoporin_N
Beta-prop_Vps41
PAC11
Motif
Other DBs
NCBI-GeneID:
11507444
NCBI-ProteinID:
XP_003662818
JGI:
49818
UniProt:
G2QDW4
LinkDB
All DBs
Position
3:complement(join(1484963..1485047,1485108..1486810,1486895..1487010,1487195..1487294))
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AA seq
667 aa
AA seq
DB search
MAHEGRDHGDRGFGFGGGGVGGHDGPPPRVRGRRPVTDYGATIVHWMRHRQPRYKGSFAG
ETERPSISYIVDMLPPHARTTSAADSVPSRHLHSSLNKIKHPINVVRWTPEGRRLLTASS
SGEFTLWNGTGFNFETIMQAHDSAIRALAYSHSDDWLVSADHDGIIKYWQPNFNNVESIR
GHTDPIRDLAFSPTDVKFVTASDDSTLRIFDFAAGAAESTLTGHGWDAKSCDWHPTKGLI
VSGSKDHLVKLWDPRTGRCLTTLHGHKNTITKTLFERVRGQCLATSARDQTARVFDLRMM
RDICLLRGHDKDISTLTWHPIHPNLLSTGGSEGSLFHYLLDEPNTPPGHSASVAPYDAAD
PASAPAQTIYPAHRIPYAHDFAIWSLDWHPLGHILASGSNDRITRFWARARPGEADNFND
RYHIGEAAAEAQGTWDRRGHRHMRQVEEEQELEDEMDGLVDQKMPIKQPPGSLPGLGTAA
SSSSAAAAAAAAAAAAGGAIPGLPGLVPPPPPPPPPGTVIPGMAGPNGNGSGSGSGSSAA
QLPFPLPPPPPPPAIASMLVGDGKNPPDFAAIAEMMKKHGIVPPPPPPPPPGRVLPPGLI
PPPPPPPGFPLPHGFPPPPPHLAAGAAAGAGAGGDQHGSGGRRRAPLPSQEESLRMEQSK
GNYTRVR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgagggcagggaccacggagaccggggctttggcttcggcggcgggggtgtc
ggaggacatgatgggcctccgccgcgagtcagaggcagacgccccgtcacggactacggc
gctaccatcgtccactggatgcgccatcgccaaccccgatataaggggtcgtttgcgggc
gagaccgagagaccgagtatcagctacattgtggacatgctacctccccacgcaaggaca
acgagcgccgcggactcggtgccgtcgcgtcacctgcactcctcactaaataagatcaag
catcccataaacgtggtgcggtggactcccgagggcaggaggttgttgacggcctcgagc
agcggggagtttaccctctggaacggcaccggcttcaacttcgagaccatcatgcaggcg
cacgactcggccatccgtgccctggcctactctcacagcgacgactggctggtgtctgcc
gaccacgacggcatcatcaagtactggcagcccaacttcaacaacgtcgagagcatccgc
ggccacacggaccccatccgggacctcgccttcagccccaccgatgtcaagttcgtcaca
gcctcggacgactcgaccctgaggatattcgacttcgccgccggagcagccgagtcgacg
ctcacgggccacggctgggacgccaagagctgcgactggcacccgaccaagggcctcatc
gtctcgggttccaaggaccatctggtcaagctctgggatccgcggacgggccggtgcctg
acgaccctccacggccacaagaacaccatcaccaagaccctctttgagcgcgtgcgcggg
cagtgcctggccacgtcggcccgcgaccagaccgcccgcgtcttcgacctccgcatgatg
cgcgacatctgcctcctccgcggccacgacaaggacatctccaccctgacctggcacccc
atccaccccaacctcctcagcaccggcggctccgagggctccctcttccactacctcctc
gacgagcccaacaccccgccgggccactccgcctccgtcgcgccctacgacgccgccgac
ccggcctccgccccggcccagaccatctacccggcccaccggatcccctacgcccacgac
tttgccatatggtctctcgactggcacccgctcggccacatcctggcgtccggctccaac
gaccgcatcacgcgcttctgggcgcgcgcccgcccgggcgaggccgacaacttcaacgac
cgctaccacatcggcgaggccgcggccgaggcccagggcacctgggaccgccgcggccac
cgccacatgcggcaggtcgaggaggaacaagagctcgaagacgagatggacggcctggtc
gaccagaagatgcccatcaagcaaccgcccggcagcctgccgggcctcggaacagcagca
tcatcatcatcagcagcagcagcagcagcagcagcggcggcggcggcaggaggagcaatc
cccggcctacccggcctggtaccacctcctcctccaccaccacccccggggacggtcatt
cccggcatggccggtcccaacggcaacggcagcggcagcggcagcggcagcagcgccgcg
cagctgcccttcccactcccgccgccgcctccgcccccggccatcgccagcatgctggtc
ggcgacggcaagaacccgcccgacttcgcggccatcgccgagatgatgaagaagcacggc
atcgtcccgccccccccgcccccgcctccgcccggccgggtcctgccgcccggtctgatc
ccgcccccgcccccgccccccggcttcccgctgccgcacggcttccccccgcccccgccg
catctggcggccggtgccgctgccggtgccggtgccggaggggaccagcatgggagcggc
ggcaggagaagggcgccgctgccgagccaggaggagagcctgcggatggagcagagcaag
gggaattatacccgggtgagatag
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