KEGG   Thermothelomyces thermophilus: MYCTH_77195
Entry
MYCTH_77195       CDS       T02231                                 
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
mtm  Thermothelomyces thermophilus
Pathway
mtm03013  Nucleocytoplasmic transport
mtm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mtm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MYCTH_77195
  09122 Translation
   03013 Nucleocytoplasmic transport
    MYCTH_77195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtm03019]
    MYCTH_77195
   03041 Spliceosome [BR:mtm03041]
    MYCTH_77195
Messenger RNA biogenesis [BR:mtm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     MYCTH_77195
Spliceosome [BR:mtm03041]
 Complex C
  Other components
   EJC/TREX
    MYCTH_77195
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    MYCTH_77195
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_1st ANAPC4_WD40 WDR55 Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st DSE1_N Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_HPS5 TP_0598_N CFAP251_N Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_ACSF4 KNTC1_N Beta-prop_WDR41 DUF7099 Beta-prop_DCAF4 ASA1 DUF1513 PALB2_WD40
Other DBs
NCBI-GeneID: 11506036
NCBI-ProteinID: XP_003659502
JGI: 77195
UniProt: G2Q2D2
LinkDB
Position
1:join(4763601..4763731,4763803..4763876,4763945..4764183,4764245..4764620,4764674..4764718,4764783..4764955)
AA seq 345 aa
MSQPGRPRIGRISKELFSSYFKDIPSQPYHEPAPGRGSSSSHHRLRLIAWNPLSTWVATV
TSEKTIRVWNPEKREHRYSTELRGHVAGIEKIAFNPAKEAELCSVSNDGAVKIWDVRTKA
CVSEIKGPSGAHSLAWAPDGSSLLVGNKRGELFQISPTKSAAVSSHQLGVDTNQMAFCWS
GKKVFIPTVDGTIRILSYPELEPVLHTSYSAGDGGPAEFMLKGHTASCLTTELSPAGKYL
ATGGADSIIALFDTKDWICQRTISRMVGPVKCLSFTFDGTYLVGGSEEGSGIDVIHTETG
ELIHTFKTAGPCEAVAWSPTRYCLAYGDLGVLRIIDADKKPSQKP
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgtcccaacccggcagacccaggatcggccgcatctccaaagaattattctcaagttac
ttcaaggatatcccgagccaaccctaccatgagccggctcccggccgcgggtcgtcgagc
tctcaccaccgactccgcctcatcgcctggaatcccctaagcacttgggtcgccacggtc
acctcagaaaagaccatccgcgtctggaaccctgagaagagagagcacaggtactcaacg
gaactcaggggccatgttgcggggattgaaaagatagcgttcaacccagcgaaagaggca
gaactctgcagtgtcagcaacgacggagctgtcaagatctgggacgtgaggaccaaggct
tgtgtcagtgaaatcaagggccccagtggtgcccactcgctagcttgggcacctgacggc
tcctcgctcctcgttggaaacaagcgcggtgaactcttccagatatcgccgaccaaatct
gcagcggtttcttctcaccagctgggcgttgacacgaaccagatggccttctgctggagc
ggaaagaaggtttttatcccaaccgttgacggtacaatacggattctctcgtatcccgag
ctcgagcctgtcttgcacaccagctactccgccggagacggaggaccggcagagttcatg
ctcaaaggccataccgcctcctgcctgacaactgagctttcacccgccgggaagtacctt
gccacagggggtgccgactccatcatagcccttttcgacaccaaggattggatatgccag
cgaacaatctcccgcatggtcggccctgtcaaatgcttaagcttcacttttgacggtact
tatttggtcggcggaagcgaagaaggctccggaatagacgtaattcataccgaaaccggc
gagctcatccacaccttcaagactgcgggcccgtgcgaagccgtcgcgtggtctccgacg
agatattgtctcgcatacggtgacctaggtgtgctacgcatcatcgacgctgacaagaag
ccttcgcaaaagccctag

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