Methanothrix thermoacetophila: Mthe_0029
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Entry
Mthe_0029 CDS
T00417
Name
(GenBank) DNA-directed RNA polymerase, subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mtp
Methanothrix thermoacetophila
Pathway
mtp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mthe_0029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtp03021
]
Mthe_0029
Enzymes [BR:
mtp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mthe_0029
Transcription machinery [BR:
mtp03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Mthe_0029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
TraB_PrgY_gumN
Motif
Other DBs
NCBI-ProteinID:
ABK13832
UniProt:
A0B558
LinkDB
All DBs
Position
27132..29762
Genome browser
AA seq
876 aa
AA seq
DB search
MSVPKRIGKIRFGLISPQEFRKMSVVKVITADTYDDDGFPIEMGLMDPRLGVIDPGLRCR
TCGGRPGECPGHFGHIDLVAPVIHVGFAKLIRKILRAICRECSKLMLSELEKKEFLRQIR
TLEDLGQPTEDVVNKVFAEARKHKTCPYCGAPQREIKFERPLSYIEDGHKLTPSDIRDRF
ERISDEDIMVMGMNPETARPEWTILTVLPVPPVTMRPSITLESGQRSEDDLTHKLVDIIR
INQRFQENREAGAPQLIIEDLWELLQYHVTTFLDNTVSGVPPARHRSGRPLKTLSQRLKG
KEGRFRGSLSGKRVNFSARTVISPYPNLSINEVGVPIEVAKELTVPIMVTPKNIEVVRKY
VMRGPDNHPGVNYVTRADGRRVKVTERNCQEVAEQLEVGWKVDRQLADGDIVLFNRQPSL
HRMSIMAHRVKVMPYKTFRLNPAVCPPYNADFDGDEMNLHVPQTEEARAEAEILMRVQEN
ILSPRFGGPIIGGIHDYVTGSFLLTHKERRLNKDRLMEVLKKLDISDIPVPAGYDENGDP
YWTGKQIFSLILPKDLNLTFKADFCSNCPVCKGEDCENDAYVVIRNGVLLKGTIDAEAVG
AFKGKVIDRIIKEYDPGVASQFLDRMTLLALRGIMLAGFSFGISDEDVPREAAEQIQDVT
RSAKESVQRLIEAYRAGELEPLPGRTLEETLEMRIMQTLGKARDAAGQIAGRYLGLDNSG
VVMAVSGARGSMLNLTQMAACVGQQSVRGERIKRGYTDRTLPHFKRGDLGAEAHGFVESS
YKKGLSPTEFFFHAIGGREGLVDTAIRTSQSGYLQRRLVNALQDLEVNYDGTVRETRGMI
VQFKYGEDGVDPSRRDYASPENVHRIIRKVLAGENA
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttccaaagaggattggaaagataaggttcggcctgatatctccgcaggagttc
aggaagatgagcgtggtcaaggtgatcacggccgatacctacgatgatgatggctttccc
atagagatgggtctgatggaccccaggctcggcgtcatagatcctggtctccgatgcaga
acatgcggcggcaggcccggggagtgccccggacacttcggacacatcgatctcgtggct
ccggtgatacacgttggcttcgcgaaactcatcaggaagatcctgagagcgatatgcagg
gagtgttcaaagctcatgctctccgagctggagaagaaggagtttctcaggcagataaga
acgcttgaggatctcgggcagcccacagaggatgttgtgaacaaggtcttcgcagaggca
aggaagcacaagacctgcccgtactgcggtgcccctcagagggagatcaagttcgagcgg
ccgctctcatatatagaggacggacacaagctcacgccctctgacataagagacaggttc
gagaggatctccgacgaggacataatggtcatggggatgaacccggagacggcaaggcct
gagtggacgatactcacggtgctgccagtgcctcctgtcacaatgagaccatctataacg
ctggagagcggacagaggagtgaggacgacctgacacacaagctcgtggatataataaga
ataaaccagcgattccaggagaaccgagaggcaggtgcgccgcagctgataatcgaggac
ctctgggagcttctccagtaccacgtcacgacattcctggataacactgtttcaggggta
cctccagccaggcacagaagcggcaggcccctcaagacactctcgcagaggctcaagggc
aaggaggggaggttcagaggctctctctccggaaagagggtcaacttcagcgcgcgaact
gtaatatctccatatccaaacctctcaataaacgaggtcggggttccgatcgaggttgca
aaggaactcacagtcccgataatggtcaccccaaaaaatatcgaggtcgtcaggaagtac
gtgatgcgggggccagacaaccatcctggtgtcaattacgtaacacgtgcagatgggagg
agagtcaaggtcaccgagagaaactgccaggaggtcgcggagcagctcgaggttggctgg
aaggtggacaggcagcttgcagatggtgatatcgttctcttcaaccggcagccctcgctc
cacaggatgtcgataatggcgcacagggtcaaggtcatgccgtacaagacattcaggctg
aacccagcggtatgcccgccgtacaacgcagacttcgatggcgacgagatgaacctccat
gtgccacagacagaggaggcgagggcagaggctgagatcctgatgcgggtccaggagaac
atcctctcccccagattcggcggcccgatcataggcgggatacacgattatgtcaccgga
agcttcctgctcacccacaaggagcgcaggctcaataaggacagactcatggaggttctc
aagaagcttgatataagcgacatccctgtgcctgcaggatatgacgagaacggcgatccg
tactggacaggaaagcagatattcagcctgatactgccaaaggatcttaacctcacgttc
aaggcagacttctgcagcaactgccctgtctgcaagggcgaggattgcgagaatgatgcg
tatgtggttatacgcaacggcgtccttctcaagggcacgatcgatgcagaggctgtgggc
gccttcaaggggaaggtgatagatcgcataataaaggagtatgatccaggggttgcgagc
cagttcctggacaggatgacgctcctggcgctccgcgggatcatgctcgccggcttcagc
ttcggcatcagtgacgaggatgtgccaagagaggctgcagagcagatccaggatgtcaca
agatccgcgaaggagagtgtccagaggcttatagaggcttacagggcgggagagctggaa
ccgcttcccggacgcactcttgaggagacgctggagatgcgcataatgcagacgctgggc
aaggcgagggatgctgctggacagatcgcaggccgttacctcggactggacaacagcggc
gtggtcatggcggtctccggcgcccgcggctcgatgctgaacctaacgcagatggcagca
tgtgtgggccagcagtcggtcaggggcgagaggataaagcgcggctacactgatagaacc
ttaccacacttcaagcgcggagatctcggcgccgaggctcatggcttcgtcgagtcgagc
tacaagaagggtttatcgccgactgagttcttcttccatgcgataggtggcagggagggt
cttgtggacaccgcgataagaacatcccagagcggctacctccagaggcgcctggtaaac
gccctacaggacctggaggtgaactacgacggcaccgtcagggagacccgcggcatgatc
gtccagttcaagtacggagaggacggggtcgatccatctaggagagactacgcaagcccg
gagaacgtgcatcgaataataagaaaggtcctcgcgggtgagaacgcatga
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