KEGG   Methanothrix thermoacetophila: Mthe_0152
Entry
Mthe_0152         CDS       T00417                                 
Name
(GenBank) TATA binding protein of transcription factor TFIID
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
mtp  Methanothrix thermoacetophila
Pathway
mtp03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mtp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Mthe_0152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mtp03000]
    Mthe_0152
   03021 Transcription machinery [BR:mtp03021]
    Mthe_0152
Transcription factors [BR:mtp03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    Mthe_0152
Transcription machinery [BR:mtp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     Mthe_0152
  RNA polymerase III system
    TFIIIB
     Mthe_0152
  RNA polymerase I system
    SL1/TIF-1B
     Mthe_0152
SSDB
Motif
Pfam: TBP DUF3378 Glyco_hydro_18
Other DBs
NCBI-ProteinID: ABK13952
UniProt: A0B5H8
LinkDB
Position
complement(142359..142910)
AA seq 183 aa
MESTINIENVVASTKLADEFDLVKIESELEGAEYNKEKFPGLVYRVKSPKAAFLIFTSGK
VVCTGAKNVEDVRTVITNMARTLKSIGFDNINLEPEIHVQNIVASADLKTDLNLNAIALG
LGLENIEYEPEQFPGLVYRIKQPKVVVLIFSSGKLVVTGGKSPEECEEGVRIVRQQLENL
GLL
NT seq 552 nt   +upstreamnt  +downstreamnt
atggagtccacaataaatatcgagaacgtggtggcatccacaaagcttgctgatgagttc
gatcttgtcaagatcgagtccgagcttgaaggcgccgagtacaacaaggagaagtttccc
gggcttgtttatagggtcaagtctccaaaggcggcttttctgattttcacgtccggcaag
gtcgtctgcaccggggccaagaacgtggaggatgtcagaaccgtcatcaccaacatggcc
cggacgctgaagtcgatagggtttgataacatcaacctcgagccggagatccacgttcag
aatattgtggcctccgcagatctcaagacggatctcaacctcaacgccatcgccctcggc
ctcgggctcgagaacatagagtacgagcccgagcagtttccagggcttgtttacaggatc
aagcagcccaaggttgtggtgctgatattcagctccggaaagctggtcgtgaccggcgga
aaatcacctgaggagtgcgaggagggcgtcaggatcgtgaggcagcagctcgagaacctc
ggactgctttga

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