Methanothrix thermoacetophila: Mthe_0265
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Entry
Mthe_0265 CDS
T00417
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
mtp
Methanothrix thermoacetophila
Pathway
mtp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mtp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mthe_0265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtp03021
]
Mthe_0265
Transcription machinery [BR:
mtp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Mthe_0265
Prokaryotic type
Archaeal type
TFB
Mthe_0265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_LysW
Cyclin_N
HTH_AsnC-type
DUF7560
Lar_restr_allev
GpA_ATPase
Cas12f1-like_TNB
Sigma70_r4
Zn_Ribbon_Prim
Zn_ribbon_IS1595
Ribosomal_S27e
Zn_ribbon_PaaD
DZR
BRF2-like_C_cyclin_rpt
HTH_24
Zn_ribbon_Elf1
Trm112p
Motif
Other DBs
NCBI-ProteinID:
ABK14062
UniProt:
A0B5T8
LinkDB
All DBs
Position
complement(265271..266284)
Genome browser
AA seq
337 aa
AA seq
DB search
MEEIERIREIERTEQEKIKERIKLQREKEKEEELDKYTVECPECGSRALVRDYERAELVC
SECGLVIDENFIDQGPEWRAFDHDQRMKRSRVGAPMTYTIHDKGLSTMIDWRNRDSYGKT
ISSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLSRNVRETAAVIYRRA
VEKNLIRGRSIEGVAAAALYAACRQCNVPRTLDEIAEVSRVSRKEIGRTYRFVSRELSLK
LMPTSPIDYIPRFCSGLNLKGDVQAKGIEILRQAAEKELTSGRGPTGVAAAAIYIASILC
NDRRTQREVADVAGVTEVTIRNRYKELAEELNIEIIL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtggaagagatagagagaattagagagatagagcgcacagagcaggagaagataaaagag
cgcatcaagctccagcgcgagaaggagaaggaagaggagcttgataagtatactgtagaa
tgtcccgagtgtggaagtcgtgctctggtcagggactatgagagagcggagcttgtatgc
tctgagtgtggcctggtcatagacgagaacttcatcgatcagggtcctgagtggagggcc
ttcgatcacgatcagaggatgaagagatcgagggttggtgccccgatgacatacacaata
catgacaagggcctatccacgatgatcgactggagaaacagggactcatacggtaagacg
atatcatctaagaaccgtgcgcagctctaccgcctgaggaagtggcagaggcgcataagg
gtgagcaacgcaacagagcgcaatcttgcgttcgcactgtcagagctggatcggatggca
tccgctcttggcctctccagaaacgtgagagagaccgcagctgttatctacaggagagct
gtcgagaagaatctgatccgcggcaggagcatagagggcgtcgcggctgctgcgctttat
gctgcgtgcaggcagtgcaacgtgcccagaacgctcgatgagatcgccgaggtctccagg
gtgagcaggaaggagatcggaaggacatataggttcgtatcgcgcgagctctcgctcaag
ctcatgccgacaagcccaatagactacatacccagattctgctccgggctcaacctcaag
ggcgatgtccaggcgaagggcatagagatactgaggcaggccgcagagaaggagctcacc
tcaggacgcggcccgaccggcgttgcggctgcagccatatacatagcctcgatcctgtgc
aacgacaggcgtacccagagggaggtggctgacgtcgccggcgtgacagaggtcaccata
aggaacaggtacaaggagcttgcagaggagctgaacatagagatcatcctctga
DBGET
integrated database retrieval system
