Methanothrix thermoacetophila: Mthe_0398
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Entry
Mthe_0398 CDS
T00417
Name
(GenBank) Pseudouridylate synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mtp
Methanothrix thermoacetophila
Brite
KEGG Orthology (KO) [BR:
mtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtp03016
]
Mthe_0398
Enzymes [BR:
mtp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Mthe_0398
Transfer RNA biogenesis [BR:
mtp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mthe_0398
Prokaryotic type
Mthe_0398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ABK14191
UniProt:
A0B667
LinkDB
All DBs
Position
402471..403772
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AA seq
433 aa
AA seq
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MEGLIPAAERDKALGMEIYITRTPGIGGVIRKSPEDFVVEEIFDEDHYEGGRYLVVEVEK
RDWDTHKLVREIARALRISQRRISFAGTKDRRAVTRQRMAIMNLDEDELIDLRIPDLKIS
VLGRTNRPLGLGDLKGNRFRIVIRDLAVDVDSARERMERITSEILEIGGVPNYFGVQRFG
EIRPVTHLVGEAIVRGDLERAVFTYLSMPFDGEPEETRAAREELWESGDVRAALRRYPRH
LTYELAMLNHLVSSPGDHAGALMVLPDNLRRMFVHAYQSYLFNRMLSMRLRRCLTFEPVE
GDIVCFSKDGMPDVSRIERVTAENIEAVKRLFDRKRAFVTLPLIGYESELADGEQGEIER
SILESEGISRESFSVKTCPDLSSPGARRPALLQVDPVFELGAESACIRFSLPPGSYATVV
LREYMKDTRDVSE
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggaggggcttattccagcggctgagcgcgacaaagctttgggcatggagatctacatc
accagaactcctggcatcggtggggttatacgcaagagccccgaggatttcgtcgtcgag
gagatatttgatgaggatcattacgagggtgggaggtatctcgtcgtcgaggtcgagaag
cgtgactgggacacgcacaaactggtaagagagatcgcgagggccctcagaataagccag
aggcgaataagcttcgcaggcaccaaggacaggagggcggtcacaaggcagagaatggcg
atcatgaacctcgatgaggatgagctgatagatctgagaatccctgatctcaagatctct
gttctcggaagaacaaacaggcctctcggtcttggagatctgaaaggcaaccgcttcagg
attgtgataagagatctcgcagtcgatgtagattccgccagggagcgtatggagcgcata
acctctgagatactggagatcgggggagtcccgaactacttcggcgtccagaggttcggc
gagatccggcctgtgacgcatcttgttggcgaggcgatcgtgagaggagatctggagcgt
gcggtattcacctatctctccatgccatttgatggtgagcctgaggagacgagggctgcg
cgtgaggagctctgggaatcgggggatgtgagagcagcgctcaggagatacccgaggcat
ctcacatacgagctggctatgctgaaccatctggtctccagtccaggagatcatgcaggc
gctttgatggttctccctgataacctgaggaggatgttcgttcatgcctaccagtcatat
ctcttcaacagaatgctcagcatgcgtctccggagatgcctcacattcgagccggtggaa
ggggatatcgtctgcttctccaaagatggaatgccggatgtgagcaggattgagagagtg
acagcagagaacatcgaggccgtaaagaggttgtttgatcgaaaacgcgcattcgtcacc
ctcccgctgatcggatatgagtctgagcttgctgatggcgagcagggcgagatcgaacgt
agcatcttggaatcagaggggatttccagggagagcttctctgtgaagacctgtccggat
ctgagctcacccggcgcgagaaggccagctcttctgcaggttgatccggtcttcgaactt
ggtgctgaaagcgcatgcattcggttctcccttcctcctggatcgtatgcaacggtggtg
ctgagggagtacatgaaggataccagggatgtatccgaatga
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