Methanothrix thermoacetophila: Mthe_0595
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Entry
Mthe_0595 CDS
T00417
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mtp
Methanothrix thermoacetophila
Brite
KEGG Orthology (KO) [BR:
mtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtp03032
]
Mthe_0595
03400 DNA repair and recombination proteins [BR:
mtp03400
]
Mthe_0595
Enzymes [BR:
mtp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mthe_0595
DNA replication proteins [BR:
mtp03032
]
Prokaryotic type
DNA Topoisomerases
Mthe_0595
DNA repair and recombination proteins [BR:
mtp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mthe_0595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
RAD51D_N
DUF4332
Cdd1
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ABK14386
UniProt:
A0B6R2
LinkDB
All DBs
Position
615381..617615
Genome browser
AA seq
744 aa
AA seq
DB search
MHLIIAEKHDAAKRISEILAGKKPTVTKVSGIDTFRFDDRVVIGLSGHIVGLDYPECYNN
WHKVDYRDLIRAEIVSRPTQERIVSALRKLGREADRVTIATDYDREGELIGVEALCILQE
VNPSIKADRVRFSAITKSEILRAFAQPEEVDFNLAASGEARQIIDLVWGAALTRFISITS
GRLGKEFLSVGRVQSPTLALIVDREKEIESFQPKPYWEIYADLEKGIRVRHSKSRIWTRD
EVDRILNSLSDVARVRSISKGERRDRPPTPFDTTSFISAASSIGFTAANAMRIAESLYTN
GYISYPRTDNTVYPPSIDLRSLLEMLSSGPFREDALELMKGSITPTKGKRSTTDHPPIYP
TSVADKDDLKEDQWKIYELVVRRFFATLSGECVWETTSISFDIGDEVFRANGSRILDLGW
RRYYPYSRAEENVLPPLREGEGLKVLSHEVLSKETQPPARFGQGRLVKLMDELGLGTKST
RHDIISKLYARAYIHGNPIRPTKTAYAVVDTLQRHAPAITKPEMTRTLENDMLKIAERKI
TKGEVIEESRQMLEAVFDELLAHRKEIEDSLREGLRVDRIVGKCRLCGSDLIIRRGRRGA
RFVGCSGYPECRFTLPLPRGGMIVVTERRCETHDMNHIRIINRGKRPWDLGCPYCNFNNW
QAKKGSKTQRMPELDDISGIGPKSRERLESAGIKTLEALVSTDPASISESTGISIKKIIS
WQESARSIIHKGEQGGEVPGSSTC
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcatcattgctgagaagcacgatgctgcgaagagaatatccgagattcttgca
ggtaagaaaccgactgttacaaaggtttccggcatcgatacatttcgttttgatgaccgt
gttgttataggcctcagcggccatattgtgggcctggattatcctgagtgctacaacaac
tggcataaggtcgattacagggatctcatcagggcggagatcgtatcgagaccgacgcag
gagaggatagtctcagctctcagaaagctcggcagagaggcagaccgcgtaacgatcgcc
acagactatgatagagagggagagctcataggtgttgaggccctctgcatactgcaggag
gtcaatccatccataaaagcggacagggtgcggttcagcgccataacaaaaagcgagatt
ctgagggcattcgcccagccggaagaggtcgacttcaatcttgccgcatccggcgaggcg
aggcagatcatagacctcgtgtggggcgctgcactgacgagattcatatcgataacatca
ggtcggctcgggaaggagttcctctctgtgggcagggttcagtcgccgacgctggcgctg
atcgtggatcgcgagaaggagatcgagtcgttccagccgaaaccctactgggagatatat
gcagatctcgagaagggtatcagagtaaggcattcaaaatccaggatctggaccagggac
gaggtcgaccgcatattgaattctctgagcgatgtggcacgcgtcagatcgatatccaaa
ggggagcggagggataggccgccaacgcccttcgataccaccagcttcatcagtgcggcc
agcagcatcggcttcacagcggcaaacgcgatgaggattgcagagtccctctacacgaat
ggctacatcagctatccaaggacagataacacagtgtacccaccatcgatcgatctgaga
tcgctgctcgagatgctctcatcaggacctttccgtgaggatgcactggagctgatgaag
ggcagcatcacacctacaaaaggaaaacgctcgacaacggaccatcccccgatatacccg
acgtctgtagctgataaagatgacctcaaagaggatcagtggaagatatacgagcttgtt
gtaaggcggttcttcgcgacactctctggagagtgcgtctgggagaccacaagcatcagc
tttgatatcggggatgaggtattcagggcgaacggctccaggattctggacttgggatgg
agaaggtactatccatacagcagggccgaggagaacgttcttcctcctctccgggaggga
gaggggctgaaggtcctcagccatgaggtgctgtctaaagagacccagccgcctgccagg
ttcgggcagggacgtctcgtcaagctcatggacgagctgggcctgggtacaaagtcgacc
aggcatgatataatcagcaagctctatgcgagggcctatatccatggcaatccgataaga
ccgacgaagactgcgtacgctgttgtcgacacgctccagcgccatgcccctgcgatcacg
aagcctgagatgacaaggactctcgagaacgacatgctcaagatcgcagagcggaagatc
acaaagggcgaggtcatcgaggagtcgaggcagatgctagaagctgtattcgatgagctt
ctcgcccacaggaaagagatagaagattcgctgagggagggacttcgtgtcgacaggatc
gtgggaaagtgcaggctgtgcggctccgatctgattataagacgtggcagacgaggtgcc
aggtttgtggggtgttccgggtatcctgagtgcaggttcacgctccccctccccaggggt
ggcatgatcgttgtcacggagcggagatgcgagacgcacgacatgaatcacatcagaatc
ataaatcgtgggaagaggccatgggatctcggatgtccatactgcaacttcaacaactgg
caggcgaaaaagggatcaaaaacgcagcggatgcccgagcttgatgatatctcggggata
ggtccgaagagcagggaacgcctcgaaagcgcgggaataaaaacgctggaggcgcttgtc
tccacagaccctgccagcatctcagagtcgactggcatcagcatcaaaaagatcatctcg
tggcaggagtcggccaggagcatcatccacaaaggagagcagggcggcgaggtgcccgga
tcatccacgtgctga
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