Methanothrix thermoacetophila: Mthe_0613
Help
Entry
Mthe_0613 CDS
T00417
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mtp
Methanothrix thermoacetophila
Pathway
mtp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Mthe_0613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtp03019
]
Mthe_0613
03009 Ribosome biogenesis [BR:
mtp03009
]
Mthe_0613
04131 Membrane trafficking [BR:
mtp04131
]
Mthe_0613
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtp04147
]
Mthe_0613
Messenger RNA biogenesis [BR:
mtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Mthe_0613
Ribosome biogenesis [BR:
mtp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Mthe_0613
Membrane trafficking [BR:
mtp04131
]
SNARE
SNARE associated proteins
Others
Mthe_0613
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Mthe_0613
Exosome [BR:
mtp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mthe_0613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
AAA_16
RuvB_N
TIP49
AAA_5
AAA_22
AAA_2
AAA_33
AAA_14
AAA_lid_PRS2_C
AAA_28
nSTAND3
Sigma54_activat
Mg_chelatase
AAA_18
NPHP3_N
AAA_7
AAA_3
IstB_IS21
AAA_17
RNA_helicase
AAA_25
Parvo_NS1
TsaE
AAA_19
ATPase
AAA_11
Zeta_toxin
AAA_24
SLFN-g3_helicase
bpMoxR
NB-ARC
DUF815
Cytidylate_kin2
Zot
Motif
Other DBs
NCBI-ProteinID:
ABK14404
UniProt:
A0B6T0
LinkDB
All DBs
Position
634908..637073
Genome browser
AA seq
721 aa
AA seq
DB search
MNDQIVLRVAEAYHRDAGKSIARISLDVINRLGLKNGDVVEIQGRNKVCALAWPGNPGDA
PDIIRIDGNLRSNLGVGIDDRVFVRRTEVKPARRVLLAPTRSIRLIGGPQYLLRILEGRP
VTKGEQIRIEMITNYLMMVVVSTTPPGPVVITRDTVINITSEQIEGFQFRDVTYEDIGGL
SREIRAIREMVELPLRHPEVFQKLGITPPKGVLLHGPPGTGKTLIARAVASETDATFTAI
SGPEIMSRYYGESEQRLRQIFEDAQKSAPSIIFIDEIDSIAPKREEVLGDLERRVVAQLL
SLMDGLTSRGEVIVIAATNRPNALDPALRRGGRFDREVEIGIPNKNGRLEILYVHTRGMP
LDDSLDLSEIAEMTHGFVGADLASLCKEAAMHTISRILPDLDIEEEIPPEILDQLKVSRE
DFLAAMKKIEPSAMREVLVEIPEVHWSDIGGLEDAKQALREAVEWPIMYPEAFEAVGIRP
PRGVLLYGPPGTGKTMIARAVATESGINFISIKGPELMSKWVGESERAVREVFRKAKQAA
PALIFFDEIDSIVPARDSGRDSHVTERVVSQLLTEIDGLVELKDVVVLAATNRPDLIDPS
LLRPGRFDRMIYIQMPDLAARKKIFEIYMRKMPVAGDVNIDELAARTDGYTGADIEMICR
EAGMLALREKIQPGMKRESLLLSQIQVRRDHFERAYQNIKPHMPPETLKEYLRIMEMFGS
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcagatagttctcagagtggcagaggcataccacagggatgcgggtaagagc
atagccaggatcagtctggatgtaattaacaggctggggctcaagaacggcgacgtggtt
gagatccagggaaggaacaaggtatgcgccctggcatggcccggaaacccgggagatgcg
cctgacataataagaatcgacggaaacctgagatcgaatctgggtgtggggatagacgac
agggtcttcgtaagacggactgaggtaaaacccgcgagaagggtgctgctcgctccgacg
aggagcataaggctgataggcggaccgcagtacctcctcaggatcctggaggggaggccg
gtcacaaagggcgagcagatacggatagagatgatcacgaactacctgatgatggtggtt
gtgagcacaactcctccagggcctgtcgtcataaccagagacaccgtcataaacataacg
agcgagcagatcgagggcttccagttcagagacgtcacctacgaggatatcggcggtctg
agcagggagatccgagcgatacgtgagatggttgagctgcccctcagacaccctgaggtc
ttccagaagctcggcataacgcctccaaaaggtgttttgctccacggtccacctggtacc
ggcaagacgctcattgccagggctgtggcaagcgagaccgacgcgacattcacggccata
tccggcccggagatcatgtccaggtactacggagagagcgagcagcgactgaggcagatc
ttcgaagatgcgcagaagagcgcgccatcgataatcttcatcgatgagatagactcgata
gcccccaagagggaggaggtactgggagatctcgaaaggagggtcgtcgcgcagctcctc
tcgctcatggatggtctcacatccaggggagaggtgatagttattgctgcgacgaaccgc
ccaaacgctctcgatcctgccctccggcgcggcggaaggtttgacagggaggtcgagata
ggaattccgaacaagaacggcaggctggagatactctatgtgcatacgaggggtatgccg
ctcgatgattccctggatctgagcgagatcgccgagatgacgcatgggtttgtgggagcg
gatctcgcatccctctgcaaggaggccgcgatgcatacgataagcaggatccttccagat
cttgatatcgaggaggagatccctccggagatactggatcagctgaaggtcagccgtgag
gactttctcgctgcgatgaagaagatcgagccgagcgcgatgcgcgaggtccttgtggag
atccccgaagtccactggtctgacatcggcggcctggaggacgcaaagcaggccctgagg
gaggccgtggagtggccgataatgtatccggaggccttcgaggctgtggggataaggcct
ccgagaggagttctcctgtatggtcctccgggcacaggaaagaccatgatcgccagggcg
gtagcaacagagtctgggatcaacttcataagcatcaaggggccggagctgatgagcaag
tgggttggcgagtccgagcgggccgttcgcgaggtcttcaggaaggcaaagcaggccgcg
cctgcgctgatattcttcgatgagatagattcgatagttcctgcgagggactcaggcagg
gattcacacgtcacggaaagggtcgtgagccagctgctcaccgagatcgatggtctcgtt
gagctgaaggatgttgtcgttctcgcagccacgaacagacctgacctgatagatccgtcg
ctcctgcgtcccggaaggttcgacaggatgatctacatacagatgccggatctcgctgcg
cgaaagaagatcttcgagatatacatgcgaaagatgccggtggcaggtgatgtgaatatc
gatgagcttgccgccagaaccgatggatacactggcgcggacatagagatgatatgcagg
gaggcaggaatgcttgccctgagagagaagatccagccaggcatgaagcgcgagtcactg
ctgctgagccagatccaggtgagaagggaccacttcgagagggcttatcagaatataaag
ccccacatgccaccggagacgttgaaggagtacctgaggataatggagatgtttggcagc
ggctga
DBGET
integrated database retrieval system
