Methanothrix thermoacetophila: Mthe_0721
Help
Entry
Mthe_0721 CDS
T00417
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mtp
Methanothrix thermoacetophila
Pathway
mtp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Mthe_0721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtp03019
]
Mthe_0721
03009 Ribosome biogenesis [BR:
mtp03009
]
Mthe_0721
04131 Membrane trafficking [BR:
mtp04131
]
Mthe_0721
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtp04147
]
Mthe_0721
Messenger RNA biogenesis [BR:
mtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Mthe_0721
Ribosome biogenesis [BR:
mtp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Mthe_0721
Membrane trafficking [BR:
mtp04131
]
SNARE
SNARE associated proteins
Others
Mthe_0721
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Mthe_0721
Exosome [BR:
mtp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mthe_0721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
CDC48_2
AAA_2
TIP49
AAA_5
AAA_14
AAA_24
AAA_28
Mg_chelatase
AAA_33
NPHP3_N
RNA_helicase
IstB_IS21
Parvo_NS1
AAA_lid_PRS2_C
ATPase_2
AAA_18
AAA_7
NACHT
nSTAND3
ABC_tran
Sigma54_activat
DUF815
NB-ARC
TsaE
AAA_25
Zeta_toxin
AAA_17
ATPase
SLFN-g3_helicase
ORC-CDC6-like
bpMoxR
KAP_NTPase
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABK14511
UniProt:
A0B737
LinkDB
All DBs
Position
complement(759511..761781)
Genome browser
AA seq
756 aa
AA seq
DB search
MSESVRLKVAEADQRDVGKGIARVSDDFMKRMGVRPLDVIEITGDRRTAALVVSAYSADQ
GLDIIRMDGLIRSNAGSSIGQYVEVRKAEWSEAKHVTLAPVTKGMQIFAPSEVLTKVFQG
RPVCKGDIISTTSVRRPPSDTFGRETMFEEIFRGFLGAQAFGLGEIKLRVISTNPSGIVK
ITDATEIELLPQAVEVSERPVPSVCYEDVGGLKNAITKVREMIELPLKHPELFDRLGIDP
PKGILLYGPPGTGKTMLAKAVANESDAYFISVNGPEIMSKYYGESEKALRDIFEEAEKNA
PAIIFLDELDSIAPKRGEVTGEVERRVVAQLLSLMDGLKERKNVLVIGSTNRPEALDIAL
RRPGRFDREIELGVPDFEGRKEIFQIHTRGMPLAEDVNIEEFAELTYGFVGADIAAVCRE
AAMNALRRILPEIDLDEPTIPKEILDRLVVQRVDFEAALREIQPSALREIMVEVPKVTWD
DIGGLEDVKQLLIEAVEWPLRYASNFKRLGINAPKGILLYGPPGTGKTMLAKAVANESDA
NFITAKGSALLSKWYGESEKRVAEIFRKARQVAPAVIFLDELDALVPVRGGAVGEPHVTE
RIVNQLLSELDGLEELHGVVVIGATNRPDIVDPALLRPGRFDELILVPVPDKPSRKKIFE
VHTRNMPLAPDVDIDALVELTEHYTGADIAAICRKAGRLALRESMSSEHVRERHFLAAIR
EIGPSVTPDTMKYYVRLAESLRKKASREIERGDMYV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatctgtgcggctgaaggttgcagaggcagatcaaagagatgtgggaaagggc
atagccagagtcagcgacgacttcatgaagaggatgggcgtacgcccgctcgatgttatc
gagataacaggggataggagaacagcagctctggttgtgagtgcttacagcgcagaccag
gggctggatatcatacgcatggacggtctgatcagatcgaacgccggatcgagcataggt
cagtacgtggaggtgaggaaggcggagtggtctgaggcaaagcatgtgactcttgcccct
gtgacgaaaggtatgcagatcttcgctccgagcgaggtgctcacaaaggtattccaggga
agaccggtatgcaagggtgatataatctcgaccacaagtgtgcgaagaccaccatcagat
acatttggcagagagacgatgttcgaggagatctttcggggtttcctcggagcgcaggcg
ttcggtttgggagagatcaagctcagagttatctccacaaatccgtcagggatcgtcaag
ataaccgatgccactgagatcgagcttcttcctcaggcagtagaggtctcagagcgcccg
gtgccgtctgtctgctacgaggatgttggagggctgaagaacgccataaccaaggtcagg
gagatgattgagctcccgctgaagcacccggagctcttcgatcggctgggcatagatcct
cctaagggtatcctcctctatggacctccaggcaccgggaagacgatgctcgcgaaggct
gtggcgaatgagagcgatgcctacttcatctctgttaacgggcctgagataatgtccaag
tactacggcgagtcggagaaggcgctgagggacatattcgaggaggctgagaagaacgct
cctgcgataatattcctggacgaactggattcgatagctccgaagcgcggggaggtcaca
ggagaggtggagaggcgtgtggtggcacaactcctctcgctgatggacggtttgaaggag
aggaagaacgttctcgtcatcggctccaccaacagacctgaggccctggatatcgccctc
aggaggcccggaaggtttgacagggagattgagctcggagtgccggattttgaggggcga
aaggagatctttcagatacatacaagaggaatgcctctcgcagaagatgtcaacatcgag
gagttcgcagaactcacctatggattcgtgggcgctgacatagcagctgtgtgtagagag
gccgccatgaacgctctgcgcaggatcctgccggagatagatctggatgagccgacaata
cccaaggagatcctcgacaggctcgtcgtccagagagtggattttgaggctgccctcagg
gagatacagccctctgcgctgagggagataatggttgaggtcccgaaggtcacatgggat
gacataggtggccttgaggatgtaaagcagctcctcatagaggccgtagagtggccgctc
cgctacgcgagcaacttcaagagactgggcatcaacgcgccgaagggaatacttctctac
ggacctccaggcaccgggaagacgatgctcgcgaaggcggtggcaaatgagagcgatgcc
aatttcataacagcaaaggggagtgcgctcctctcgaaatggtatggagagagtgagaag
cgggtcgcagagatattcagaaaggccagacaggttgctccagctgtgatattcctggac
gagctcgatgcactcgttccggtccgtggcggtgcggtcggcgagcctcatgtcacggag
aggatcgtgaatcagcttttatcagagctggacggcctggaggagctccatggtgttgtg
gtaataggagcaacgaaccgcccggatatcgtggatccggcgcttctgaggcccggacgc
ttcgacgagctgatactagtgccagtgcctgacaaaccctcgagaaagaagatattcgag
gtccacacgaggaatatgcctttggctccggatgttgatatagatgcgcttgttgagctg
acagagcactacactggagctgatatagcagctatatgcaggaaggcaggccgtttggcg
ctcagagagagcatgagctcggagcatgtccgggagaggcacttccttgcggcaattcgc
gagatagggccatctgttactccggacaccatgaagtactatgtgcgactggcagagtcg
ctgaggaagaaggcatccagggagatagagcgcggagatatgtacgtgtga
DBGET
integrated database retrieval system
