KEGG   Methanothrix thermoacetophila: Mthe_0779
Entry
Mthe_0779         CDS       T00417                                 
Name
(GenBank) ATP dependent helicase, Lhr family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mtp  Methanothrix thermoacetophila
Brite
KEGG Orthology (KO) [BR:mtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtp03400]
    Mthe_0779
Enzymes [BR:mtp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Mthe_0779
    5.6.2.6  RNA 3'-5' helicase
     Mthe_0779
DNA repair and recombination proteins [BR:mtp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Mthe_0779
SSDB
Motif
Pfam: DEAD DEAD_assoc Helicase_C WH_Lhr ResIII DEXQc_Suv3 YdjO CCDC154 Cas3-like_C_2 ParB_dimer
Other DBs
NCBI-ProteinID: ABK14569
UniProt: A0B795
LinkDB
Position
827406..830204
AA seq 932 aa
MNVFDLLSPTIRENLQQMGFSEPTLPQRMAIPEILAGNNVLLIAPTGSGKTEAAVLPVLH
NIMDIDGPGIKTLYITPLRALNRDMLRRLEEWSDALGVKIAVRHGDTTKGERASQSRSPP
DLLITTPETLQVMLTGKRLRSNLKSVRTVIVDEIHELASSKRGSQLAVLLERLVEVAGEI
QRIGLSATVGSPEEVAKLLTGMSRDCRILRADVERLVDFRVVAPRPGRGDHALAGQLGCE
PPLAAHISCIRDLVRLKKSLIFVNTRQAAEVLGFRLKMLGEPIEVHHGSLSREARVDAED
AFKRGDLRGLICTSSMELGIDIGDVEHVIQYSSPREVSRLIQRVGRSGHGIGRVSSGTIL
ATCPDDIAEACAIARRASTGELEEVRIHETPLDVLANQLIGLSLDFGEIGIERAFEIVKR
SYPFRDLSMDEMLSVLDVLRGNRLCNVENGIIKRRRRGWEYYFENLSMIPDEKRYDVYDM
VSRRQIGTLDEAFVVSFASPGATFVTRGEIWEIVEIEDDTIKVVPIQRSGEIPSWSGEEI
PVPYGVAQEVGEIRSHLARELEEHGEEDAIRWLLARYPVDREAAEQLVDQIKHQIAAGCA
VPDDKTVTIESDGSFAVINSCIGHRANDAFGRAITAILSTRFGSSVGMEIDPYRIQLTLP
KRMLAEELLNVISDLSSAQMKVILELSLKNTTLFRWKMIHVARKFGSLSKDIDYERVSLV
RVLGVFENTPMYREAIREIYQERLDVDTAGNILDRMVSGEIQVITCDLSPIGSSGRGGGR
DLISPEYADAAVIELLKNRILHDRVILFCVSCKKWRSLREVGRVPDRPECPLCGSRMIAA
LKPWEDEEIKIVRMPEEKKSAEDKRRTKRVYRNANLVLSYGKTAAIALASRGLGPETAAR
VIKKMHSDELEFYRDILRAEREYARTKRFWGD
NT seq 2799 nt   +upstreamnt  +downstreamnt
gtgaatgtcttcgatctgctgagccccacgatcagggagaaccttcaacagatgggtttt
tccgagccgactctgccgcagaggatggcgatacccgagatccttgccggaaacaatgtt
cttctcatagcaccaacaggatccggaaagacagaggcagcagttcttcctgtgctccat
aatatcatggatatcgacggtccgggaatcaaaaccctctacataactccgctgcgagcg
ctcaacagagacatgctgaggcggctggaagagtggagcgacgcgctgggagtgaagata
gcggtcaggcatggagacacgacgaagggagagcgcgccagccagagcagatcgccgccg
gatctcctcataacaaccccggagacgctccaggtcatgctgacaggaaagaggctcaga
tcgaacctgaagagcgtcaggacggtgatagtggatgagatccacgagctcgcatcatcc
aagagaggatcgcagctcgcagtcctccttgagcggcttgtggaggttgcgggcgagatt
cagaggatcgggttatcagccaccgttggctcgccggaggaggtagcaaagctgctcacc
ggcatgtccagggattgcaggatcctcagggctgatgtggagaggctcgtggatttcagg
gttgtggcgccccgcccggggcggggtgatcacgcgctcgcaggccagctcggatgcgag
ccgccgcttgcagcgcacatatcgtgcataagagatcttgttagattaaaaaagagtttg
atcttcgtcaacaccagacaggccgcagaggttctcggattcaggctgaagatgctcgga
gagccgatcgaagtccaccacggcagcttatcgagagaggccagagtggatgcagaggat
gcattcaagcgcggagatctccgcggcctgatatgcacgtcctccatggagctcggcatc
gatatcggcgatgtggagcatgttatacaatacagctcgcccagggaggtctccaggctc
atccagcgtgttggcagatcaggccacggcatcggcagggtttcctcaggcaccatattg
gcgacatgccccgacgatatcgccgaggcatgcgcaatcgcccggcgggcatcaaccggt
gagcttgaagaggtgaggatacacgagacgcccttggatgtcctggcgaaccagcttatc
ggcctctccctggactttggggagatagggatcgagagagcatttgagatagtgaaaaga
tcgtaccccttcagggatctcagcatggatgaaatgctcagcgtgcttgatgtgctgaga
ggaaacaggctgtgcaacgtcgagaacggcatcataaaaagaaggcgcaggggctgggaa
tactacttcgagaacctctcgatgatacctgacgagaaacgctacgatgtctacgatatg
gtctccaggcgtcagatagggactctcgacgaggcttttgttgtaagcttcgccagtcca
ggagcgacgttcgtcacccgcggagagatctgggagatcgtcgagatagaggatgatacc
ataaaggtcgtgccgatccagaggagcggggagatcccgagttggagcggtgaggagata
cctgtgccgtacggcgtggcgcaggaggttggagagatcaggtcacacctggcgagggag
ctggaggagcacggagaggaggatgcgatccgctggcttctggcacgctatcctgtggac
agggaggctgcagagcagctagtcgatcagataaagcatcagattgctgcaggctgtgct
gttcctgatgacaaaactgtgacgatcgaatctgacggctcttttgcggtgataaactcg
tgcatcggccacagagcgaatgatgcgtttggaagggccataaccgcgatactctcgacg
cgcttcggctccagcgtcggcatggagatcgacccatacaggatacagctgacgctacct
aagaggatgctggcagaggagttgctgaatgtcatcagcgatttgagctccgctcaaatg
aaagtgattttggagctgagcctgaagaacaccacactcttcagatggaagatgatccat
gtggcgaggaagttcggctcgctctcaaaggacatagactacgagagggtatctcttgtc
agggtgctgggggtcttcgagaacacaccgatgtacagagaggcgatccgtgagatatac
caagagcgcctggatgtcgatacagcgggaaacatcctggatcgcatggtgtctggggag
attcaggtgatcacatgcgatctgagcccgataggctcctcggggagaggaggtggacgt
gacctgatctctcctgagtatgctgatgcagctgttatagagctcctcaagaacaggata
ctccatgacagggtgattctcttctgcgtcagctgcaagaaatggagatctttgagagag
gtcggaagggtgcctgaccggcctgagtgtccgctctgcggttccaggatgatagcagcg
ctgaagccctgggaggatgaggaaataaagatcgtcaggatgcctgaggagaagaagagc
gctgaggacaagaggcgcacaaagagagtttacagaaacgcaaatctcgttctcagctac
gggaagactgctgccatcgcgcttgccagcaggggtctcggccctgagacagccgccagg
gtcataaaaaagatgcactccgatgagcttgagttctacagggacatactcagagctgag
agggagtacgcccggacaaagaggttctggggggattga

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