Methanothrix thermoacetophila: Mthe_0886
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Entry
Mthe_0886 CDS
T00417
Name
(GenBank) nucleic acid binding, OB-fold, tRNA/helicase-type
KO
K07466
replication factor A1
Organism
mtp
Methanothrix thermoacetophila
Pathway
mtp03030
DNA replication
mtp03420
Nucleotide excision repair
mtp03430
Mismatch repair
mtp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mthe_0886
03420 Nucleotide excision repair
Mthe_0886
03430 Mismatch repair
Mthe_0886
03440 Homologous recombination
Mthe_0886
03460 Fanconi anemia pathway
Mthe_0886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtp03000
]
Mthe_0886
03032 DNA replication proteins [BR:
mtp03032
]
Mthe_0886
03400 DNA repair and recombination proteins [BR:
mtp03400
]
Mthe_0886
Transcription factors [BR:
mtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Mthe_0886
DNA replication proteins [BR:
mtp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Mthe_0886
DNA repair and recombination proteins [BR:
mtp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Mthe_0886
MMR (mismatch excision repair)
Mthe_0886
DSBR (double strand breaks repair)
HR (homologous recombination)
Mthe_0886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
Ssb-like_OB
OB_MEIOB_N
Motif
Other DBs
NCBI-ProteinID:
ABK14674
UniProt:
A0B7K0
LinkDB
All DBs
Position
complement(960680..961795)
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AA seq
371 aa
AA seq
DB search
MDDQVEEIFRQVSDRISVEEFEARVNEKVSLMGGLCDPLTAAMLVAHELGAGEILTKIKD
IRPESGAVTFTGRVVHISEVREFSRSDGSIGRVASLTVGDETGMIKVTLWDDATDLVVSG
DIRVDQCLKVRGFPRLGRSGTEISIGRGCSIQEIDSDIKVRVEPLKIAEIRPDMGEISII
ARVIDPGKAKEFTRKDGSKGFVRSMLLGDDTGSINITLWNDHALIDASEGDVLEVINCSS
RERYGFIELQTSRYTVIRKSSSEIKYSERFTPIADLRVGEICNIAGYLTGIGELREFQRD
DGTKGYVTSINVTDETGRVRVSLWGDLYRLLENADLGCRVEIMGGQVKNGWNGELEVSCG
WRSRITFAPPG
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
gtggacgatcaggtggaggagatcttcaggcaggtctcagataggataagcgttgaggag
ttcgaggccagggtgaacgagaaggtctccctgatgggcgggctctgcgatccgctcact
gcagccatgctggtcgcacatgagctcggtgctggcgagatcctgacgaagataaaggat
atcaggcccgagtcaggggctgtcacattcacaggcagggttgttcatatctcagaggtg
agggagttcagccggtcggatggatccattggaagggtcgcgtctcttacagtgggtgat
gagaccgggatgataaaggtgacactctgggatgatgcgactgatcttgtagtctcaggg
gatatcagggtcgaccagtgcctcaaggtcagaggcttccccaggctcggaagatctggg
acggagataagcatcggcagaggctgcagcatccaggagatcgacagcgacataaaggtc
agggtcgagcctctgaagatcgctgagatcaggccggatatgggcgagatcagcataatc
gcaagggtaatagatcctgggaaggctaaggagttcaccagaaaggatgggtcgaaaggg
ttcgtcagaagcatgctgctcggcgatgatactgggagcataaatatcacgctctggaac
gatcatgccctcatcgatgcttcggagggggatgttctcgaggtgatcaactgcagctcc
agggagagatacggattcatcgaactccagaccagcaggtacacggtgataagaaagagt
tcctctgagatcaagtactccgagcgcttcacgcccatcgcggatctcagggtgggggag
atctgcaatatagctgggtatctcacagggatcggtgagctaagggagtttcagagggac
gatggcacaaaaggatatgtcacgagcataaacgtcacagacgagacaggacgtgtgagg
gtctctctctggggggatctttaccggctgctggagaatgcggatctcggctgcagggtc
gagatcatgggcggacaggtgaagaacggctggaacggcgagctggaggtcagctgcggc
tggaggagcaggatcactttcgcgccgcctggataa
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