Methanothrix thermoacetophila: Mthe_0989
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Entry
Mthe_0989 CDS
T00417
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mtp
Methanothrix thermoacetophila
Brite
KEGG Orthology (KO) [BR:
mtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtp03016
]
Mthe_0989
Enzymes [BR:
mtp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Mthe_0989
Transfer RNA biogenesis [BR:
mtp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mthe_0989
Prokaryotic type
Mthe_0989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABK14774
UniProt:
A0B7V0
LinkDB
All DBs
Position
complement(1073240..1074043)
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AA seq
267 aa
AA seq
DB search
MKIALKIAYLGDRYYGFQRQPGLRTVESVMRDALLRIGVANGDFCYAGRTDRGVSALGQV
IDFWIEEDRAYLAFPRVINSLLPSDVWAWARAVAPVGFSARWSALWREYRYFLFSPDIDL
SAVREAAGHLVGTHDFRNFSMSKVDTVRRIISIDVNAHCGIVVFDVRAEGFIWNMVRRIV
GALELIGIGEKPVDWILELLDPSTPHGAPTAPPEGLMLMDVGYSDLEWEEDRYTKQRVSR
MLISEARRRAAMSGVIQEMLRRMRDTF
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcactgaagatcgcatatctcggagataggtactacggatttcagaggcag
ccggggcttcgcacagtggagtctgtcatgagagatgcccttctgagaatcggggtcgca
aacggggacttctgctatgcgggaagaacggacagaggcgtaagcgcgctcggccaggtt
atcgatttctggattgaagaggatagagcgtatctcgcattccccagagtgataaatagt
ttactgccatcagatgtatgggcatgggccagggctgtcgcgccggtcgggttcagcgcc
aggtggagcgcattatggagggagtacaggtatttcctcttctctcctgatatcgatctg
agcgctgtgagagaggctgcagggcatctcgtcggcacccatgactttcggaacttctcc
atgtcaaaggtggacactgttcgcaggatcatctccatcgatgtgaatgcgcattgtggg
attgtcgtatttgatgtgagagctgaggggtttatctggaacatggtccgacgcatcgtc
ggggccctcgagcttataggcattggcgaaaaacccgtggactggatcctggagcttctc
gatccatcgaccccacacggcgcgcccacagcaccgccggaggggctgatgctgatggat
gtcggctacagcgacctggaatgggaggaggatcgctacacgaagcagcgcgtctcgagg
atgctcatcagcgaggcaagacggagagctgcgatgtctggggttatacaggagatgctc
cggcggatgagagatacgttctga
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integrated database retrieval system
