Methanothrix thermoacetophila: Mthe_1232
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Entry
Mthe_1232 CDS
T00417
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
mtp
Methanothrix thermoacetophila
Brite
KEGG Orthology (KO) [BR:
mtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtp03019
]
Mthe_1232
Messenger RNA biogenesis [BR:
mtp03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
Mthe_1232
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ABK15011
UniProt:
A0B8I7
LinkDB
All DBs
Position
complement(1327526..1329988)
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AA seq
820 aa
AA seq
DB search
MNVLAQAGKSRILLLPIKDDRVVFEGYLRIKDTPHGPRPYKFLVKKDTERYLPPDDSVRL
LRKANGIFVVDGEEALEQRFVELLNAYQLKHRRVSVCQHCLGRRRVKLLGEDSVSYRGTR
ICYRCAVDEINREAEFRGIGRAGRRHLAGILARRRDLDEVMDLLNLQRIDPDLTRYDIVP
ASEEVASLSLDEIEIPIELREHLKRRLSKLLPVQAMAVRKGLLEGKSLLVVSATATGKSL
IGEIAGIKNLIEGRGKLLFLVPLVALANQKFEQLSAYSELGFRTSIKVGVSRIRLGRGFS
LPTDLDADIIVGTYEGIDQVLRSGRNLGKIGTVVIDEVHMLEDPDRGHRLAGMIARLRFV
APRAQFIYLSATVGNPAALSKRLGAELVEYEIRPVPIERHLIFTSPADKLHLIRRLVGSG
ASVRSSTGYKGQTIIFTNSRKKCFSIAQSIPGAIAYHAGLQYHERKRIEELFAQGKINAV
VTTSALAAGVDFPASQVIFETLAMGIEWLTVHEFNQMLGRAGRPGYHDRGLVYILAEPGR
RYNGLESEDEVALRLLSSSVEDVSPQYEEEQQLEEVLANTTVARSMDELKELHKITIGMD
DLNRSLEKLRERNLVRDISPTRLGRVVAAHFLSPEQADLVIRGINAGKSPTEIAVDLEQF
DALFLRAADQISFKIRMPVAQRVFQGSFFDLISSPDLLKLDRRIQEECLRFARDFMRCTC
REAPYCGCVERSVSMRILEMRSQGMDPKGILYALSDDYGIYGYEGDLINYLDQIVRYLEA
IEAISRVLGKMEVAEEAARSKRGIEGVDGGSDANMLDTLG
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgttctggcgcaggccgggaaatccaggattcttctgctgcccataaaggatgac
agggtggtcttcgagggatatctgcgcatcaaggatactccacacggacccagaccatac
aagtttctggtgaagaaagataccgagaggtatcttcccccagacgattctgtgaggctg
ctccggaaagcgaatggaatctttgtggttgatggcgaggaggccctggagcagaggttt
gttgagctcttgaatgcatatcagctcaagcaccgcagggtctctgtctgccagcactgc
ctgggaagaagaagggtcaagcttctcggagaagactcagtgagctacaggggcaccaga
atatgctacagatgcgctgtcgatgagataaacagggaggccgagttcagaggtataggg
agagccgggaggaggcacctcgctggaatactcgcgagaaggagagacctggatgaggtc
atggatctcctgaacctccagaggatagatccggatctcacgcgttacgacatcgtacca
gcctctgaagaggtcgcatctctgagccttgatgagatcgagattcccatagaactcaga
gaacatctcaagaggcggctcagcaagctcctgccggtacaagcgatggctgtgagaaag
gggcttcttgagggtaagagccttcttgttgtatctgcgacggcgaccggaaagagcctg
atcggggagatcgctggcatcaagaacctgatcgaaggaagggggaaacttctttttctc
gtcccgctggtcgccctggccaaccagaagttcgagcagctctccgcttattcagagctg
ggattcaggacatcgataaaagtgggcgtgagccgcatacgtcttggaagggggttcagc
ctgccgacggatctggacgctgacatcatcgtcggaacatatgaggggatagaccaggtt
ctccggagcggcaggaacctcggaaaaataggaaccgtggtcatagacgaggtccacatg
ctcgaggatcctgatcgcggccaccgtctcgcgggaatgatcgccaggctgagattcgtc
gctccccgggcgcagttcatatacctctcagcgaccgtcgggaatccggccgctctctca
aagaggcttggtgcggagctggtcgagtacgagataagacctgtgcccatagagcgacat
ctgatcttcacatcccctgcggataagctgcatctgataagaagactggtgggatcggga
gcgtctgtgagatcctcaacaggatataagggacagacgataatcttcacgaactccagg
aagaagtgcttctcgatcgcgcagtcgattccaggagcgatcgcataccatgcaggactg
cagtaccacgagcggaagaggattgaggagctcttcgctcagggcaagatcaatgcggtc
gtcactacatccgcgcttgcagcgggcgtggatttccctgcatcgcaggtgatattcgag
acgcttgcgatgggaatcgagtggctcaccgttcatgagttcaatcagatgctaggcagg
gcgggcaggccagggtaccatgacaggggtcttgtgtacatactcgcagagcccgggagg
cgctataacggcttggagagcgaggatgaggttgcactgaggctcctcagcagctcagtt
gaggacgtctcaccgcagtatgaggaggagcagcagctcgaggaggttctcgcaaacaca
acagtcgcccgatccatggatgagctgaaggagttacacaagatcactatcggtatggac
gatctcaacagatccttggagaagctgcgtgagaggaatctcgtgagggacatatcaccc
accaggctcggcagggtggtggcagcgcacttcctcagcccggagcaggcggatctcgtg
ataagaggcataaatgcagggaaatctcccacagagatcgccgtcgatctcgagcagttc
gatgccctgttcctgagggcagcagaccagatatcattcaagatcagaatgccggtggca
cagagggtattccaggggtcattcttcgatctcatctctagcccggatctcctaaagctc
gatcgcagaatccaagaggagtgcctgcgcttcgccagagatttcatgagatgcacgtgc
agggaggcgccgtactgcggctgtgtcgagcggtcggtctcgatgaggatcctggagatg
agatcacaggggatggacccgaaggggattctgtacgccttgagcgacgattacgggatc
tacggatacgagggggatctgatcaactacctcgaccagattgtgagatatctggaggcg
atcgaggcgatttccagggttctggggaagatggaggtcgccgaggaagctgccagatcg
aagagggggattgaaggggtggatggggggagtgatgcgaacatgctcgatacgttgggg
tga
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