Methanothrix thermoacetophila: Mthe_1393
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Entry
Mthe_1393 CDS
T00417
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mtp
Methanothrix thermoacetophila
Brite
KEGG Orthology (KO) [BR:
mtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtp03032
]
Mthe_1393
03400 DNA repair and recombination proteins [BR:
mtp03400
]
Mthe_1393
Enzymes [BR:
mtp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Mthe_1393
DNA replication proteins [BR:
mtp03032
]
Prokaryotic type
DNA Topoisomerases
Mthe_1393
DNA repair and recombination proteins [BR:
mtp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mthe_1393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
ABK15168
UniProt:
A0B8Z4
LinkDB
All DBs
Position
1487586..1489472
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AA seq
628 aa
AA seq
DB search
MSETMYDASHIKVMEGLEAVRHRPSMYIGSTDVHGLHHLVYEVVDNSVDEAMAGYCKEIS
VVIHGDGSVSVKDDGRGIPVDIHPQYNRPAVEIVMTVLHAGGKFDHDTYHVSGGLHGVGV
SVVNALSEWLEVEVSREGRVYRQRYERGRPVSDLQETGVSENTGTTVRFKPDPEIFEVTD
FSFDVLSSRLRELAFLNRGLKISITDERSGRSKTFHYDGGIISFVQYLNKSKEVLHPNPI
YFSRVRDDVSVEVAMQYNTSYNESVFTFANNINTREGGTHLSGFRAALTKTVNDFVREKK
LLKGDAKLTGDDLREGLVAVVSVRLPDPQFEGQTKTRLGNSAVRGLVESLVSEGLMEYFE
LNPQVAEAIVEKATEAMRAREAARKAKEITRRKTALTSSGLPGKLADCVERDPAKSELYI
VEGESAGGSAKQGRNRHFQAVLPLRGKILNVERARLDKMLKNEEIRNLITALGTGIGDDF
DITKARYHKIIIMTDADVDGSHIRTLLLTFFYRYMQPLIEAGYVYIAQPPLYQVRKGKSV
KYAYSDEELAKLLEDGKAVVQRYKGLGEMNPEQLWETTMNPEKRTLLRVTLKDAVEADEI
FSVLMGEQVEPRRVFIETHAREVRNLDV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgagacgatgtatgatgcgagtcatatcaaggtgatggaggggcttgaggcggtc
aggcacaggccctcgatgtacataggatccacagatgtacatggattgcaccatcttgtt
tatgaagtggtcgataacagtgttgatgaggcgatggccggttactgcaaggagatatcc
gtggtcatccatggagacggctcggtctcagtaaaggatgatggtcgtggcattcctgtc
gatattcatccgcagtacaaccggcctgctgtggagatagtcatgaccgtgctccacgct
ggtgggaagtttgaccacgatacgtatcacgtctctggcgggctgcatggcgtcggagta
tctgttgtcaacgccctctcagagtggcttgaggttgaggtcagccgagagggaagggta
tacaggcagagatacgagcgcggcaggcccgtatcagatctccaggagacaggcgtttct
gagaataccggaaccaccgtgaggttcaagcccgatcccgagatctttgaggtcaccgac
ttcagctttgacgttctttcatcacgcctcagagagctcgcatttctgaaccgcggtctt
aagatcagcataactgatgagaggtcaggcaggagcaagacgttccattatgatggggga
ataatctccttcgtccagtacctgaataaatccaaggaggtgctgcatccaaacccgata
tacttctccagggtgcgggatgatgtatcggtggaggtggcgatgcagtacaacacgagc
tacaacgagtctgtgttcaccttcgcgaacaacataaacacccgggaggggggaacgcac
ctctcaggtttcagagcagcgctgacaaaaacggtaaacgattttgtcagggagaagaag
cttctgaagggggatgcaaagctcacaggtgatgacctcagggaggggctggtcgctgtg
gtcagcgttcggctccccgatccgcagttcgagggtcagaccaagacgaggctggggaac
agcgcggttcgtggcctagttgaatccctcgtgtccgaggggctgatggagtacttcgag
ctgaatccgcaggtggccgaggcgatcgtggagaaggcgacagaggcgatgcgcgcccgc
gaggccgccaggaaggcaaaagagatcacgaggcggaagaccgcgctgacatcatcaggg
ctcccgggaaagctagcagactgcgtggagcgcgatcccgcaaagagcgagctgtacatc
gtagagggggagtcggcgggtggttctgcgaagcagggcaggaatagacacttccaggca
gtcctgccgctcagaggtaagattctgaatgtggagcgcgcgagactcgacaagatgctc
aagaacgaggagatcaggaacctcataacagccctcggcaccggcataggtgatgatttc
gatataacaaaagccaggtaccacaagatcatcataatgacagatgctgatgttgatgga
tcccacatacgcacgcttctcctcacgttcttttacagatacatgcagcctctgatagaa
gctggctacgtctacatcgcccagccgccgctgtaccaggtcagaaaggggaagagcgtg
aagtacgcgtactcagatgaggagctcgcaaagcttctggaagatggcaaggctgtggtc
cagcggtacaagggcctgggcgagatgaaccctgagcagctatgggagaccacgatgaat
ccagagaagaggacactcctcagggtgacgctgaaggatgcagtcgaggctgatgagatc
ttctccgtactgatgggggagcaggtcgagccgagaagggtcttcatagagacgcatgcg
agagaagtgagaaacctggacgtgtga
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