Methanothrix thermoacetophila: Mthe_1484
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Entry
Mthe_1484 CDS
T00417
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mtp
Methanothrix thermoacetophila
Brite
KEGG Orthology (KO) [BR:
mtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtp03400
]
Mthe_1484
DNA repair and recombination proteins [BR:
mtp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mthe_1484
Archaeal homologous recombinant proteins
Mthe_1484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
SbcC_Walker_B
AAA_27
AAA_21
Rad50_zn_hook
ABC_tran
MukB
ABC_ATPase
Nbs1_C
Motif
Other DBs
NCBI-ProteinID:
ABK15257
UniProt:
A0B983
LinkDB
All DBs
Position
1599405..1602590
Genome browser
AA seq
1061 aa
AA seq
DB search
MHLNRLVLRNFKKYRRADITFQDGLTGIIGGNGAGKSTIVEAIAWALYGSRAYTVEKLEK
RLIKNVNARPEESVEVHLTLSIGKNEIVISRIMKGKSMLPDASLCINGQEVAKGMREVDA
HLSKLMKISFQDFMRTFYARQKDLDNLIREGGAGKRDYLLKLLGLEDIREIGLEITKDDL
REIERRINLASGALSELGDVERRIEEIRAQEASARAELIKREIALKDAENERKRAREDLE
RLDEKRQEHMRLKREIEHVQGYIADRERTAREERARLEGIEEKKRKLHALTSDLKRLNEI
RKHLHDLEAARRDYEQLNSILKSLQIERREALRSLNELETRLDELYRCRSEMEGLREKAD
LYVTTQRELEELEIKRERFTSHVSSIASLDAERSALLRDYKMKADLVRELREARRSLPDL
ERRLSVLESLKRELEELERAKEMHRRLDELLSERDSRIERRAQLLNRLDIIHKKLSEIGD
LAREERGLREREVQLETLIETLNQKRTEIESRRNLARSKMHESQSNLKRIESLGAESPCP
TCERPLGDQYSRLTEKYREEIRRYRDDYETATNELRDLNERVKNAQHLRERLRASAESLG
KRRSDLASLEAEQREVMLQLSEMRERISELDGEIDAIGQAEYDSKRHEEVKRSLSGYNEL
IDKRARLLARLENLPGLESELENTREKASALDERIFEHSRSISILDYDERAYLRARSTLS
ELQSSHERYGLLLQQTGEIERLEKLLEALRIRVQRLDGDMLKVEGELSELAFDPNEYDML
RAEETRLAEIESIANRLRVEIAAEDLSRSRLFEAETDLRRLHTQMAELSTRLEELGYTDA
SYENAKRILSDADERLRCANEEYAKMRDELRRLEWSLSGLNDDLKRKRELERKIDELNRK
AQVVSVVRDLLVRFMDALLVRVRNEIAQNAARIMEEVTGKYSILKIDENFNILVDDRGTD
YPIWRFSGGEIDMIALSVRIAISEYLMRSFGEESGYSFMILDEVFGSQDIEHRERMINML
RSLGVRFPQLFAISHISDVQGQFDNTIVVSEDDMGNSVAYQ
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcaataggctggtgttgcggaacttcaagaagtacaggcgtgcagatataaca
ttccaggacgggctcactggcataataggcgggaatggagcaggcaagagcacgatcgtc
gaggcgatagcctgggcgctgtatggcagcagggcatacactgtcgagaagctcgagaag
aggctcataaagaacgtgaacgccaggcccgaggagtcggtggaggttcatctgacgctc
tccattggaaagaatgagatcgtcatatcgagaatcatgaaggggaagagcatgctgccc
gatgcatctctgtgcatcaacggccaagaggtcgcaaagggcatgcgcgaggtcgatgct
catctctctaaactgatgaagataagcttccaggacttcatgaggacattctatgcgcga
cagaaggaccttgataatctcataagagagggtggagctggaaagagggattacctgctg
aagctcctcggccttgaggacatccgtgagatcgggctcgagatcacgaaggatgatctg
agagagatcgagagaaggatcaatctggcctccggagcgctctcggagctgggcgatgtg
gagaggaggatcgaggagataagagcgcaggaggcatctgccagggcagagctgatcaaa
cgggagattgctctcaaagacgctgaaaatgagcggaagagggctagggaggatctggag
cggctggacgagaagagacaggagcatatgcgtctgaagcgggagatcgagcacgttcag
ggctacatcgcagatagggagaggactgcaagagaggagcgcgcaaggctcgaggggatt
gaggagaagaagagaaagctccatgctctcacatcagatctgaagcgcctgaatgagata
agaaagcacctccatgacctggaggcggctcggagagattacgagcaactgaactcaatt
cttaagagccttcaaatagagagaagggaggcgcttcgctcactgaatgagcttgagaca
aggcttgatgagctctacagatgccgcagtgagatggaggggctcagggagaaggcggat
ctctatgtgactacacagagggagctggaggagctcgagataaagagagagcggttcacc
tcccacgtctcatctatcgctagcctggatgcagagaggtccgcgcttttgagagattac
aagatgaaggctgaccttgtgagagagcttcgggaggccaggagatcgcttccagatctc
gagcgccggctgtctgtcctggaatcgctgaagagggagctggaggagcttgaaagggca
aaagagatgcatcgcaggcttgatgagctgttatctgagagagactcacgcatcgagagg
agagctcagcttctgaatcggcttgatattattcacaaaaagctctctgagatcggcgat
cttgcccgggaggagaggggtctcagagagagggaggtccagctggagacgctcatagag
actctgaatcaaaagaggacagagatcgagagccggcgcaatctcgcaagatccaagatg
cacgagtctcagagcaacctcaaacgaatcgagagcctcggggccgagagcccctgcccg
acgtgcgagcgcccacttggcgaccagtactctcgacttacggagaagtacagggaagag
atcagaaggtacagagacgattacgagactgctacaaatgagctccgcgatttgaatgag
cgcgtcaaaaatgcgcagcatctcagggagcgtctcagggcatccgcagaatcgctgggc
aagaggaggagcgatctcgcatcgcttgaggctgagcagagggaggtcatgctccagctc
tcagagatgagggaaagaatctccgagctggatggggagatcgatgccataggccaggct
gagtatgattcgaagagacacgaagaggtcaagcgctcgctttcaggttacaatgagctc
atcgataagcgggcgaggctcctggcacgcctcgaaaacctccccgggctggagagcgag
ctggagaataccagagaaaaagcatccgcgctggatgagagaatattcgagcactcgaga
agcatctccatcttagattacgatgagcgtgcatacctgagggcgagatcgactctctca
gagctccagagctcccacgagaggtacgggctcctcctccagcagacaggcgagattgaa
aggcttgagaagctgctggaagccctgagaatacgggtccagaggctggacggagatatg
ctgaaggtggagggggagctgtcagagctggcattcgatccgaatgagtatgatatgctc
agagcagaagaaacaaggcttgctgagatcgaatcgatcgcgaaccgcctcagggtcgag
atcgcagctgaggatctctcgagatcaagactgttcgaggccgaaacggatctcagaagg
ctgcacacgcagatggctgagctcagtacgcgtcttgaggagctgggttataccgatgca
tcttatgagaatgcgaagagaatactatcagatgcggatgagaggctgaggtgtgcgaac
gaggaatacgccaaaatgcgcgatgagctcaggaggctggagtggtccctatctggcctg
aatgatgatctgaagagaaaaagggagctggagaggaagatcgatgagctaaacagaaaa
gcacaggtggtatccgtagtcagggacctgctggtgcggttcatggacgcgctcctggtg
agggtgagaaatgagatcgcccagaacgcggcaaggataatggaggaggtcaccggcaag
tacagcatactcaagatagatgagaacttcaacatactggtcgatgacaggggcacggat
tatccgatatggaggttttcaggcggagagatagatatgatcgccctctctgtgagaata
gcgataagcgagtatctcatgaggtctttcggggaagagagcggctactccttcatgata
ctcgatgaggtcttcggatcgcaggatatcgagcacagggagaggatgataaacatgctc
aggagtctaggcgtgagattcccacagctgtttgcgataagccacatcagcgatgtccag
ggtcagttcgacaacacgatagtggtgagcgaggatgatatgggaaacagcgttgcatat
cagtga
DBGET
integrated database retrieval system
