Methanothrix thermoacetophila: Mthe_1602
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Entry
Mthe_1602 CDS
T00417
Name
(GenBank) Cna B domain protein
KO
K20276
large repetitive protein
Organism
mtp
Methanothrix thermoacetophila
Pathway
mtp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mtp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Mthe_1602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SdrD_B
CarboxypepD_reg
Big_7
SpaA
Big_9
BiPBP_C
Cadherin_5
CarbopepD_reg_2
Y_Y_Y
fn3_3
Motif
Other DBs
NCBI-ProteinID:
ABK15370
UniProt:
A0B9J6
LinkDB
All DBs
Position
complement(1738035..1746005)
Genome browser
AA seq
2656 aa
AA seq
DB search
MKEMISLYDNICSYRNADRVLMVTISVIFGIFLIISASGQEPGLDPMGPGLGENQPPVVT
SFVSDPEGPQDAGVVVRWTVNAFDPDGDVLEYMFLLKGPATGDSWKDMTGWINETRWVWR
TSDNDIGTNEIEVRVRDGYDDLDDGYDAKETARYIINRPVPPNRPPQVTGLVASPESPQV
AGTPVVWSASATDPDGDALEYQFLLDGNVVKDWSGDNTWRWSTTDADVGSHSVTVVVRDG
KNEPVSASSQYTIIMPNRPPQVTGLVASPESPQVAGTPVVWSASATDPDGDALEYQFLLD
GNVVKDWSGDNTWRWSTTDADVGSHSVTVVVRDGKNEPVSASSQYTIIMPNRPPQVTGLV
ASPESPQVAGTPVVWSASATDPDGDALEYQFLLDGNVVKDWSGDNTWRWSTTDADVGSHS
VTVVVRDGKNEPVSASSQYTIIMPNRPPQVTGLVASPESPQVAGTPVVWSASATDPDGDA
LEYQFLLDGNVVKDWSGDNTWRWSTTDADVGSHSVTVVVRDGKNEPVSASSQYVIEARVV
PNDPPVIESLVASPESPQVAGTPVVWSASATDPDGDALEYQFLLDGNVVKDWSGDNTWRW
STTDADVGSHSVTVVVRDGKNEPVSASSQYTIIMPNRPPQVTGLVASPESPQVAGTPVVW
SASATDPDGDALEYQFLLDGNVVKDWSGDNTWRWSTTDADVGSHSVTVVVRDGKNEPVSA
SSQYVIEARVVPNDPPVIESLVASPESPQVAGTPVVWSASATDPDGDALEYQFLLDGNVV
KDWSGDNTWRWSTTDADVESHSVTVVVRDGKNEPVSASSQYTIIMPNRPPQVTGLVASPE
SPQVAGTPVVWSASATDPDGDALEYQFLLDGNVVKDWSGDNTWRWSTTDADVGSHSVTVV
VRDGKNEPVSASSQYVIEARVVPNDPPVIESLVASPESPQVAGTPVVWSASATDPDGDAL
EYQFLLDGNVVKDWSGDNTWRWSTTDADVGSHSVTVVVRDGKNEPVSASSQYVIEARVVP
NDPPVIESLVASPESPQVAGTPVVWSASATDPDGDALEYQFLLDGNVVKDWSGDNTWRWS
TTDADVGSHSVTAGVRDNRHATNGTADNTVTEEYEILRSAAPENVTAPTNVTENVTAPVN
VTVPINVTPPISEENVVLPVMSISGYKFNDLNGNGAMDSGEAGLDGWTIVLTMPDQTEVQ
TTTGFDGYYRFEGLAPGLYTVRELQKAGWDSTTSESQQVNLTDSDVTGINFGNRARTYSI
SGTLFEDVNNNGANDGEPGVKGWEIRLTKPDATESVATTGDDGSYRFEDLTPGVYTLRVV
LQPGWNVSISSKDVSITDTDQSSVDFGARMIGFTISGRVFSDLDANGVNDGEPGLSGWTV
KLTMPDGGERTAVTADDGFYSFDRLSPGTYKIEAVKQDGWSQTAPKTGSHSVEIKDTSVP
SIDFGYAGLRSISGVVFNDINANGVREAGETGVRGWSVTLVQGENATSMTETGADGTYRF
ESLSPGTYRVELIPQDGWKATTESREIQIGTADVSFDIGVAGSLSIKGMKYYDLNANKVR
DEGEPGIPGSDVNLIENGKVVRSTKTSEDGTYTFDNVAPGTYTISDPLPEGYVVVTSSTI
TVTVTTNTVLDASFGIAGVYTISGRKFNDLNGDGSDAGDPGISGWGIVLDGTTTLGVHIT
ETQYTGSDGSYTFGNIAPGTYKISELSRPGWTQTHPGGDGSHTVEISSSSVSGKNFGNRY
VSTKSSIWGTKFNDKNNNGVRDAGEQGLAGWEIRISNSTYTRTAITDSDGWYNFTGLDAG
TYTVTETLKPGWSVTKPSGGSYTITLNAGETKTGVDFGNYKSLPTGATLTSDKTSPQNVG
TTIVWTASATSTVPLEYSFWLKGPSTSGLWQEKRSWSSDNTWSWNTGGLEPGTYDIRVWI
RDSYHSETGDVQVTKSFTLKETNRPPDLRLIMVDRPSPQYAGAWVSFRAVASDPERDPLQ
YKFLLRGPSTGYTWREMTSWTSRNIWTWKTSFFDIGFNEIMVYVKDGKHSPDYDDKRICG
YMILGYIPRPNLPPVITSFGSSLPSPQYAGSSVTWSATAIDPEGYQVYYRFMLNGPSTGY
TWKVVQDWSLSNTWTWRTSDIDIGRSQVIVQVRDGLHAPPTGWDDQASAAFSIVVKPNLP
PVITSLTPDKPSPQASGTQIKWTAVATDPDRDPIYYRFWLKGPSTGNTWQIVRDWSTSNT
WTWSSDLGDAGDYTVFVYVRDGKHATPNSYDSAKGQVYRLLQPRLEIVTGAQVRDQIKDS
PRLISTDRGFALVCQSWERGRNSNGDIKIQTYDASMKPLSSKLLTSDDAYQDRPSVIYDG
KNYYVVYVSNEKGNMDIFMKKLDQSLNVLETKQLTTSASDQDSPALLKVGEDFFLAYQSW
EGGRSSNGDVYLTRFDSTWNPIRSVRLAADSYYQDIPSIVLASGYIYVSYVSEDRGNLDV
IVKKLDMNLNMLDTRRLTGGSTDEDQPYLLWSNGEFMLVYRSDEGIALERYRRDWSSIDK
SLVLSGDLSWPSIAYGKGHYWLSYLEDNSIYATPLKITAALPPCDVRASFSSRRANRAYT
MTLRFFNNYGELIDPTSMEMSWSPQDAAKQGSTLTRISTGMYRMRSTFGAPGEKSFRITA
MIDGSQLDKTIRVTVR
NT seq
7971 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagatgatttcgttgtatgataatatttgcagttacaggaatgcggatcgagtt
cttatggtcacaatctcggtcatttttggcatattcctgatcatatctgcatccgggcag
gaacccggactggaccccatggggccgggtcttggtgagaatcagcccccagttgtaacg
tcatttgtaagtgatccagaggggccacaggatgcgggtgtggttgtgagatggaccgtt
aacgcatttgatcccgatggggatgtactggagtacatgtttctgctgaaaggtccggcg
acaggagatagctggaaggatatgaccggctggataaacgagacaagatgggtgtggagg
acatctgataatgatatcggcaccaacgagatcgaggttcgtgtgagagatggatacgat
gatctggatgatggttacgatgcgaaggagactgcacgctacatcatcaatcgtccggtt
ccacccaaccgtccacctcaggtgacaggactggttgcatctcctgagtcgcctcaggtt
gcgggtactcctgtcgtctggagcgcgagtgcaacagaccctgacggggatgcgctcgag
taccagttcctgctcgatgggaatgtcgtgaaagactggtccggtgataatacatggaga
tggtcgacaacagatgctgatgtcggatcgcacagtgtaacggttgttgttagagatgga
aagaacgagcctgtttcagcatcatctcagtacacaatcatcatgccaaaccgtccacct
caggtgacaggactggttgcatctcctgagtcgcctcaggttgcgggtactcctgtcgtc
tggagcgcgagtgcaacagaccctgacggggatgcgctcgagtaccagttcctgctcgat
gggaatgtcgtgaaagactggtccggcgataatacatggagatggtcgacaacagatgct
gatgtcggatcgcacagtgtaacggttgttgttagagatggaaagaacgagcctgtttca
gcatcatctcagtacacaatcatcatgccaaaccgtccacctcaggtgacaggactggtt
gcatctcctgagtcgcctcaggttgcgggtactcctgtcgtctggagcgcgagtgcaaca
gaccctgacggggatgcgctcgagtaccagttcctgctcgatgggaatgtcgtgaaagac
tggtccggcgataatacatggagatggtcgacaacagatgctgatgtcggatcgcacagt
gtaacggttgttgttagagatggaaagaacgagcctgtttcagcatcatctcagtacaca
atcatcatgccaaaccgtccacctcaggtgacaggactggttgcatctcctgagtcgcct
caggttgcgggtactcctgtcgtctggagcgcgagtgcaacagaccctgacggggatgcg
ctcgagtaccagttcctgctcgatgggaatgtcgtgaaagactggtccggcgataataca
tggagatggtcgacaacagatgctgatgtcggatcgcacagtgtaacggttgttgttaga
gatggaaagaacgagcctgtttcagcatcatctcagtatgtcatagaggcgagggttgta
ccgaacgatccgccggtgatcgagagcctggttgcatctcctgagtcgcctcaggttgcg
ggtactcctgtcgtctggagcgcgagtgcaacagaccctgacggggatgcgctcgagtac
cagttcctgctcgatgggaatgtcgtgaaagactggtccggcgataatacatggagatgg
tcgacaacagatgctgatgtcggatcgcacagtgtaacggttgttgttagagatggaaag
aacgagcctgtttcagcatcatctcagtacacaatcatcatgccaaaccgtccacctcag
gtgacaggactggttgcatctcctgagtcgcctcaggttgcgggtactcctgtcgtctgg
agcgcgagtgcaacagaccctgacggggatgcgctcgagtaccagttcctgctcgatggg
aatgtcgtgaaagactggtccggcgataatacatggagatggtcgacaacagatgctgat
gtcggatcgcacagtgtaacggttgttgttagagatggaaagaacgagcctgtttcagca
tcatctcagtatgtcatagaggcgagggttgtaccgaacgatccgccggtgatcgagagc
ctggttgcatctcctgaatcgcctcaggttgcgggtactcctgtcgtctggagcgcgagt
gcaacagaccctgacggggatgcgctcgagtaccagttcctgctcgatgggaatgtcgtg
aaagactggtccggtgataatacatggagatggtcgacaacagatgctgatgtcgaatcg
cacagtgtaacggttgttgttagagatggaaagaacgagcctgtttcagcatcatctcag
tacacaatcatcatgccaaaccgtccacctcaggtgacaggactggttgcatctcctgag
tcgcctcaggttgcgggtactcctgtcgtctggagcgcgagtgcaacagaccctgacggg
gatgcgctcgagtaccagttcctgctcgatgggaatgtcgtgaaagactggtccggcgat
aatacatggagatggtcgacaacagatgctgatgtcggatcgcacagtgtaacggttgtt
gttagagatggaaagaacgagcctgtttcagcatcatctcagtatgtcatagaggcgagg
gttgtaccgaacgatccgccggtgatcgagagcctggttgcatctcctgagtcgcctcag
gttgcgggtactcctgtcgtctggagcgcgagtgcaacagaccctgacggggatgcgctc
gagtaccagttcctgctcgatgggaatgtcgtgaaagactggtccggcgataatacatgg
agatggtcgacaacagatgctgatgtcggatcgcacagtgtaacggttgttgttagagat
ggaaagaacgagcctgtttcagcatcatctcagtatgtcatagaggcgagggttgtaccg
aacgatccgccggtgatcgagagcctggttgcatctcctgaatcgcctcaggttgcgggt
actcctgtcgtctggagcgcgagtgcaacagaccctgacggggatgcgctcgagtaccag
ttcctgctcgatgggaatgtcgtgaaagactggtccggcgataatacatggagatggtcg
acaacagatgctgatgtcggatcgcacagtgtaacggctggcgtcagggacaacaggcat
gctacaaatggaacagctgacaacacagtcactgaggagtatgagattctgagatctgcg
gctccagagaatgttaccgcacctaccaatgtcacagagaacgtgacagctcctgtgaac
gtgacagttccgatcaatgtaacaccgccgatctcagaggagaatgttgttctgccggtg
atgagcatatctggatacaagttcaatgatctgaatggaaatggcgccatggactctggc
gaggctggcctggatggatggactatcgttctgacgatgccagaccagacagaggtccag
accacgaccggattcgacgggtactacaggtttgagggcctcgctccaggactgtacact
gttagggagctgcagaaagctggctgggattctacaacatctgagagccaacaggtgaac
ctgaccgattcggatgtgacaggaatcaacttcggcaacagagccagaacatactcgata
agcggcacgctgttcgaggatgtgaataacaatggcgccaatgacggcgagccgggcgtg
aaggggtgggagatacgtctgacgaagccggatgccactgaaagtgttgcaacgacagga
gacgatggctcttacagattcgaggatcttacgcctggagtatacacgctcagagtggtt
ctgcagcccggctggaacgtgagcatatcctctaaagatgtgagcatcacagacacggat
cagagcagtgtggacttcggagcccggatgatcgggttcacgatatccggaagggtattc
agcgatcttgacgctaacggtgtcaacgatggcgagccagggctctcaggatggactgtg
aagctgacaatgccagatggaggcgagaggactgctgtcaccgctgatgatggattctat
tcgttcgatcgtctcagccccggcacctacaagatcgaggctgtgaagcaggacggctgg
agccagaccgcgccgaagaccggatcacacagtgtggagataaaggatacaagcgtgccc
agtatcgatttcggatatgcaggtttgagatcgatatcaggagtagtattcaatgacatc
aacgccaacggtgtaagagaggcgggcgagacaggggtcaggggctggagcgtaaccctt
gtccagggcgagaacgccacctctatgaccgagacgggagcggatggcacatacagattc
gagagcctgtccccgggcacctacagggtggagctgatcccgcaggatggctggaaggcg
acgacggagagcagggaaatacagataggcacggctgacgtgagcttcgatatcggtgtt
gccggaagtctgtctataaaaggcatgaagtactacgatctgaacgcgaacaaggtcagg
gacgagggcgagcccggaattccggggagcgatgttaacctgatagagaacgggaaggtc
gtgaggagcacaaagacatctgaggacggcacatacacattcgataacgtcgcgcctgga
acgtacaccatcagcgatccgcttcctgagggctatgtggtcgtgacgtcatcaaccatc
acagtgacagttaccacaaacacagtccttgatgcgagcttcggtatagcaggcgtttac
accatctccggaagaaagttcaacgatcttaacggggatggaagcgacgctggcgatcct
gggatctcgggatggggcatagtcctggatggcaccacgactctgggcgtgcacataacg
gagacgcagtacacgggctctgatggatcgtacaccttcggtaatatagcaccgggcacg
tacaagatcagcgagctctccagacctggctggacccagacacatccgggaggagatggt
tcacataccgtcgagatctccagctcaagcgtatcgggaaagaacttcggcaacaggtac
gtctcgacgaagtcgtctatctggggaaccaagttcaacgataagaacaacaacggtgtg
agggacgcaggcgagcagggccttgctggatgggagataaggataagcaacagcacctac
accaggacagcgatcacagacagcgacggatggtacaacttcacaggacttgatgcagga
acatacacagtcactgagacgctgaagccaggctggagcgtcacgaagccgagcggtgga
tcttacacgataacgctcaacgcaggcgagacaaagacaggcgtcgacttcggcaattac
aagtccctgccaacgggcgcgacgctgacatcggataaaacaagcccgcagaacgtcggc
acgacgatagtgtggactgcaagcgcaacatcgacggtgcctctggagtacagcttctgg
ctcaaggggccgtcgacatcgggactctggcaggagaagagaagctggtcctcagataac
acatggtcctggaacacaggaggactggagcctggcacttatgatatccgtgtatggatc
agagacagctaccacagcgagaccggtgatgtgcaggtcactaagagcttcacgctcaag
gagacgaacaggcctccagatctgcggctgataatggtcgacaggccgagcccgcagtac
gctggcgcctgggtcagcttcagggcagtcgcatcagatcctgagagagatccgctgcag
tacaagttcctgctgagaggaccttccacaggttacacctggagggagatgacctcctgg
acgtccagaaacatctggacatggaagacatcgttcttcgatatcggtttcaacgagata
atggtatacgtgaaggatggaaagcactccccggattatgatgataagaggatctgcggc
tacatgatcctgggatacataccgcgcccgaacctgccgcctgtgataaccagcttcggc
tcgagcctcccgagcccgcagtacgcagggagctctgtgacgtggagcgctacagcgatc
gatcctgagggctaccaggtctactacaggttcatgctgaacggcccgtccacaggctac
acatggaaggttgtgcaggactggtcgctctcgaacacgtggacatggaggacgtcggat
attgatatcggcaggtctcaggtgatagtccaggtcagagacggcctccatgcgcctccg
acaggctgggacgaccaggccagcgcggcgttcagcatcgttgtgaagccgaacctgccg
cctgtgataacatcgctcacgcccgacaaaccaagcccgcaggccagtggaacccaaatc
aaatggaccgcagtggccacagatcctgatagagatccgatctactacaggttctggctg
aagggcccatcgaccgggaacacatggcagatagttagagactggtcgacctccaacaca
tggacctggagctcggatcttggagatgctggtgattacacagtcttcgtctacgttagg
gacgggaagcatgcgacaccaaactcctacgacagcgccaagggccaggtctacaggctg
ctccagccgaggctggagatcgtgaccggcgcccaggtcagggatcagatcaaggactca
cccaggctgatctccacggacaggggatttgcgcttgtctgccagtcatgggagcgtggc
aggaacagcaacggcgacatcaagatacagacctatgatgcatcgatgaaaccgctgagc
agcaagctgctgacaagcgacgacgcataccaggacaggccatcggtcatctacgacggg
aagaactactatgtcgtctacgtctccaacgagaagggaaacatggacatcttcatgaag
aagctcgaccagagcctgaacgtgctggagacaaaacagctcacaacatctgcaagcgat
caggactctcctgctctgcttaaggtgggtgaggatttcttcctggcgtaccagtcatgg
gaaggtgggaggagcagcaacggtgatgtctacctgacacgcttcgattccacctggaat
ccaatcaggagtgtaaggctcgcagccgacagctactaccaggacatcccatcgatcgtc
ctggccagcggctacatctacgtctcttatgtgtcagaggatcgcgggaatctcgatgtg
attgtcaagaagctcgacatgaacctcaacatgctggatacgagaaggctgacgggagga
tccacagacgaggatcagccgtacctgctgtggagcaatggtgagttcatgctggtgtac
aggagcgatgaagggattgcgctagagaggtacaggcgcgattggagcagcatcgataag
agcctcgtgctgagcggtgatctaagctggccatcaatcgcttatggcaaaggacattac
tggttatcatacctagaggacaacagcatctacgctacacctctgaagataacagccgcg
ctgccgccatgcgatgtcagggcgagcttcagctctagaagggcaaacagggcatacaca
atgactctgcggttcttcaataactatggcgagctcatcgacccgacgtcaatggagatg
agctggagcccgcaggatgctgctaagcaggggagcacgctcaccagaatctccacaggc
atgtacaggatgcgctcgacattcggcgctccaggggaaaagagcttcagaataacggcg
atgatcgatggaagccagctcgacaagaccatcagggtcactgtgagatga
DBGET
integrated database retrieval system
