Methanothrix thermoacetophila: Mthe_1650
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Entry
Mthe_1650 CDS
T00417
Name
(GenBank) Transcription factor IIE (TFIIE), alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mtp
Methanothrix thermoacetophila
Pathway
mtp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mtp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mthe_1650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtp03021
]
Mthe_1650
Transcription machinery [BR:
mtp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Mthe_1650
Prokaryotic type
Archaeal type
TFE
Mthe_1650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Rad50_zn_hook
HypA
GntR
HTH_9
RepL
Rep_fac-A_C
Zn_Ribbon_TF
Sigma70_r4_2
DUF2229
AMP_deaminase
Zn_ribbon_10
Motif
Other DBs
NCBI-ProteinID:
ABK15417
UniProt:
A0B9P3
LinkDB
All DBs
Position
complement(1793197..1793700)
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AA seq
167 aa
AA seq
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MVAVENPIHRAYLLKIVGEEGLRIVEAMPEEEVTDEHLAEITGISLNTVRKSLYLLYEHR
LAIYRRKRDPESGWLTYLWKICPESLDSALEAEVRKLINKLNARLRYEKDHVFYACVNGC
ARFVFEEASENNFTCPFCQGSLEYMENSTIVEVIEERIKELSAALCS
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
gtggtagcagtggagaatccaatccacagggcgtatctgctaaagatcgttggcgaggag
ggtctgaggatcgtcgaggccatgccagaggaggaggtaactgatgagcatctcgccgag
atcacagggatcagcctcaatacggtgagaaaatcgctttatctgctctacgagcacagg
ctggctatctacaggagaaagagagatccggagagtggatggctgacgtatctctggaag
atctgccctgagagccttgacagcgcgcttgaggcagaggtcaggaagctgataaacaag
ctcaacgccaggctccgctacgagaaggatcatgtgttctatgcatgcgtgaacggatgc
gcccgatttgtgttcgaggaagcaagcgagaacaacttcacatgcccgttctgccagggc
agcctggagtacatggagaacagcacaattgtagaggtgatagaggagcggataaaggaa
ctgagtgctgcgctctgctcctga
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integrated database retrieval system
