Mycobacterium tuberculosis HKBS1: HKBS1_2609
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Entry
HKBS1_2609 CDS
T03154
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
mtq
Mycobacterium tuberculosis HKBS1
Pathway
mtq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HKBS1_2609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtq03400
]
HKBS1_2609
Enzymes [BR:
mtq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HKBS1_2609
DNA repair and recombination proteins [BR:
mtq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HKBS1_2609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
UstYa
Motif
Other DBs
NCBI-ProteinID:
AHJ43255
LinkDB
All DBs
Position
complement(2760191..2760997)
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AA seq
268 aa
AA seq
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MPEGHTLHRLARLHQRRFAGAPVSVSSPQGRFADSASALNGRVLRRASAWGKHLFHHYVG
GPVVHVHLGLYGTFTEWARPTDGWLPEPAGQVRMRMVGAEFGTDLRGPTVCESIDDGEVA
DVVARLGPDPLRSDANPSSAWSRITKSRRPIGALLMDQTVIAGVGNVYRNELLFRHRIDP
QRPGRGIGEPEFDAAWNDLVSLMKVGLRRGKIIVVRPEHDHGLPSYLPDRPRTYVYRRAG
EPCRVCGGVIRTALLEGRNVFWCPVCQT
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaggggcatacgctgcatcggctggcccggctgcaccagcgccggttcgccggt
gcgccggtctcggtgtccagcccccagggccggttcgccgattcggcttccgcgctcaac
ggtcgggtgttgcggcgggccagtgcctggggcaaacacctgttccatcactacgtcggc
ggccccgtggtgcacgtgcatctcgggctctatggcaccttcaccgaatgggcacgcccc
acagatgggtggctacccgaacccgcggggcaggtgcggatgcggatggtcggggcagaa
ttcggcaccgacttgcgcggcccgacggtgtgtgagtcgatcgacgacggcgaggttgcg
gacgtggttgccaggctgggacccgacccgttgcgtagcgacgccaacccgtcgtcggca
tggtctcggatcaccaagtctcgcaggcccataggcgcgctcttgatggaccaaacggtg
atcgccggtgttggcaacgtctaccgtaatgagttgctttttcggcaccggatcgaccca
cagcggcccggccgcgggatcggtgagccggaattcgacgcggcctggaacgatctggtg
tcgttgatgaaggtgggcttgcgccgcggcaagatcatcgtggtgcgccccgaacatgac
catggtctgccgtcatatctgcccgaccggccccgcacctatgtgtaccgccgagccggc
gagccgtgtcgggtgtgtgggggagtgatccgcacggcactgctcgagggccgcaatgtt
ttctggtgcccggtctgtcagacctga
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