Mycobacterium tuberculosis HKBS1: HKBS1_2903
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Entry
HKBS1_2903 CDS
T03154
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mtq
Mycobacterium tuberculosis HKBS1
Pathway
mtq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HKBS1_2903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtq03019
]
HKBS1_2903
Messenger RNA biogenesis [BR:
mtq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HKBS1_2903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AHJ43549
LinkDB
All DBs
Position
complement(3055374..3057050)
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AA seq
558 aa
AA seq
DB search
MDVDLPPPGPLTSGGLRVTALGGINEIGRNMTVFEHLGRLLIIDCGVLFPGHDEPGVDLI
LPDMRHVEDRLDDIEALVLTHGHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAEKCREYR
ITPVFVEVREGQSTRHGVFECEYFAVNHSTPDALAIAVYTGAGTILHTGDIKFDQLPPDG
RPTDLPGMSRLGDTGVDLLLCDSTNAEIPGVGPSESEVGPTLHRLIRGADGRVIVACFAS
NVDRVQQIIDAAVALGRRVSFVGRSMVRNMRVARQLGFLRVADSDLIDIAAAETMAPDQV
VLITTGTQGEPMSALSRMSRGEHRSITLTAGDLIVLSSSLIPGNEEAVFGVIDALSKIGA
RVVTNAQARVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAASTGVPQESI
LLAENGVSVDLVAGKASISGAVPVGKMFVDGLIAGDVGDITLGERLILSSGFVAVTVVVR
RGTGQPLAAPHLHSRGFSEDPKALEPAVRKVEAELESLVAANVTDPIRIAQGVRRTVGKW
VGETYRRQPMIVPTVIEV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtagaccttcccccgccaggtcccctgacctccggcgggttgcgggtcaccgcg
ctgggcggcatcaacgaaatcggccgcaacatgacggttttcgaacacctgggccgactg
ttgattatcgactgcggtgtgttgtttcctggccacgacgagcccggtgtcgatctgatc
ctgccggacatgcgccatgtcgaagaccggcttgacgacatcgaggcgctggtgttgacc
cacgggcacgaggaccacatcggggcgattccgtttctgctcaagctgcgacccgacatc
ccggtcgtcggctcgaagttcaccttggctctggttgcagagaaatgtcgtgagtaccgc
ataacaccggtgttcgtcgaggtccgcgagggccagagcacccggcacggcgtgtttgag
tgcgagtacttcgccgtcaaccattccactccggacgcgttggccatcgcggtgtatacc
ggcgcgggaaccatcctgcacaccggcgacatcaagttcgaccaattgccaccggacggc
cgtcccaccgatctaccgggcatgtcgcggctcggcgacaccggcgtggacctgttgctg
tgcgactcgacgaacgccgagatccccggtgtcgggccatcggaaagcgaagtgggccca
acgctgcaccggctcatccggggtgccgacggacgggtgatagttgcgtgtttcgcctcc
aacgtggatcgggtacagcagatcatcgatgccgcagtggcattgggccggcgagtgtcg
ttcgtcggccgatcgatggtgcgcaacatgcgcgtcgcaaggcaactgggcttcctacga
gtggctgattccgatctcatcgacatcgccgccgccgaaacgatggcgcccgaccaagtt
gtgttgatcaccaccggcacccaaggcgagccgatgtcggcgttgtcgcgaatgtcgcgt
ggggagcatcgcagcatcacgttgactgctggtgatctcatcgtgttgtcgtcgtcgctg
atccccggcaacgaggaggcggtcttcggagtcatcgatgcactgtccaagatcggcgcc
agagtcgtcaccaacgcccaagcaagggtgcatgtttccggccacgcgtacgccggtgag
ctgctgttcctctacaacggggtgcggccgcgcaacgtgatgccggtgcacggaacctgg
cggatgctgcgcgccaatgccaagctggccgccagtaccggcgtaccgcaagagtcaatt
ctgttggccgagaacggtgtcagcgtcgacctggttgccggcaaagccagtatctccggt
gcggtgccggtgggcaagatgttcgtcgacggcttgatcgccggcgacgtcggcgatatc
accctgggcgagcggctcattttgtcgtcgggctttgtcgcggtgaccgtcgtggtcaga
cgtggcaccggccagccgttggctgcgccacatctacactcgcggggtttctccgaagat
cccaaggcgctcgaacccgccgtgcgcaaggtggaggcagagctggaatcgttggtggcc
gccaacgtcaccgatccgatccggatcgctcaaggggtgcgccgcacggtcggcaagtgg
gtgggggaaacctatcgccgccagccgatgattgtgccgacggtcatcgaggtgtaa
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