Mycobacterium tuberculosis HKBS1: HKBS1_3860
Help
Entry
HKBS1_3860 CDS
T03154
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mtq
Mycobacterium tuberculosis HKBS1
Brite
KEGG Orthology (KO) [BR:
mtq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtq03032
]
HKBS1_3860 (topA)
03400 DNA repair and recombination proteins [BR:
mtq03400
]
HKBS1_3860 (topA)
Enzymes [BR:
mtq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HKBS1_3860 (topA)
DNA replication proteins [BR:
mtq03032
]
Prokaryotic type
DNA Topoisomerases
HKBS1_3860 (topA)
DNA repair and recombination proteins [BR:
mtq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HKBS1_3860 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AHJ44506
LinkDB
All DBs
Position
complement(4080551..4083355)
Genome browser
AA seq
934 aa
AA seq
DB search
MADPKTKGRGSGGNGSGRRLVIVESPTKARKLASYLGSGYIVESSRGHIRDLPRAASDVP
AKYKSQPWARLGVNVDADFEPLYIISPEKRSTVSELRGLLKDVDELYLATDGDREGEAIA
WHLLETLKPRIPVKRMVFHEITEPAIRAAAEHPRDLDIDLVDAQETRRILDRLYGYEVSP
VLWKKVAPKLSAGRVQSVATRIIVARERDRMAFRSAAYWDILAKLDASVSDPDAAPPTFS
ARLTAVAGRRVATGRDFDSLGTLRKGDEVIVLDEGSATALAAGLDGTQLTVASAEEKPYA
RRPYPPFMTSTLQQEASRKLRFSAERTMSIAQRLYENGYITYMRTDSTTLSESAINAART
QARQLYGDEYVAPAPRQYTRKVKNAQEAHEAIRPAGETFATPDAVRRELDGPNIDDFRLY
ELIWQRTVASQMADARGMTLSLRITGMSGHQEVVFSATGRTLTFPGFLKAYVETVDELVG
GEADDAERRLPHLTPGQRLDIVELTPDGHATNPPARYTEASLVKALEELGIGRPSTYSSI
IKTIQDRGYVHKKGSALVPSWVAFAVTGLLEQHFGRLVDYDFTAAMEDELDEIAAGNERR
TNWLNNFYFGGDHGVPDSVARSGGLKKLVGINLEGIDAREVNSIKLFDDTHGRPIYVRVG
KNGPYLERLVAGDTGEPTPQRANLSDSITPDELTLQVAEELFATPQQGRTLGLDPETGHE
IVAREGRFGPYVTEILPEPAADAAAAAQGVKKRQKAAGPKPRTGSLLRSMDLQTVTLEDA
LRLLSLPRVVGVDPASGEEITAQNGRYGPYLKRGNDSRSLVTEDQIFTITLDEALKIYAE
PKRRGRQSASAPPLRELGTDPASGKPMVIKDGRFGPYVTDGETNASLRKGDDVASITDER
AAELLADRRARGPAKRPARKAARKVPAKKAAKRD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacccgaaaacgaagggccgtggcagcggcggcaatggcagcggccggcgactg
gtcatcgtcgagtcgcccaccaaggcgcgcaagctggcctcctacctgggctctggctac
atcgtcgagtcctcccgggggcacatccgtgacttgccgcgggccgcgtcggatgtaccc
gcaaagtacaagtcgcagccgtgggcgcggctcggggtcaacgtcgacgccgacttcgaa
ccgctctacatcatcagcccggagaaacggagcaccgtcagcgagctcaggggcctgctc
aaagacgtggacgagctgtatctggccacggatggggaccgtgagggcgaagctattgcc
tggcatctgctggaaaccctcaaaccgcgcataccggtaaagcggatggtcttccacgag
atcaccgaaccggcgatccgcgccgccgccgagcacccccgcgacctagacatcgacctg
gtcgacgcgcaggagacccggcgcatcctggaccggctgtacggctacgaagtcagccca
gtgctgtggaagaaggtcgcccccaagttgtcggcgggccgggtgcagtcggtggccacc
cgcatcatcgtggcgcgcgaacgcgaccgcatggcgttccgcagcgcggcctactgggac
atccttgccaagctggatgccagcgtgtccgacccggacgccgcgccgcccaccttcagc
gcccggctgacggccgtggctggccggcgggtggccactggccgcgatttcgactcgctg
ggcacgctgcgcaaaggcgacgaagtcattgtgctcgacgaggggagcgcgaccgcgttg
gccgcgggcctggatggcacgcagctgaccgtggcctcggccgaggagaagccctacgcc
cggcgcccgtacccgccgttcatgacctccacgctgcagcaagaggccagccgcaagctg
cggttctccgccgagcggacgatgagcatcgcccagcggctgtacgaaaacggctacatc
acctatatgcgtaccgactccaccacgctgtcggagtcggcgatcaacgccgcacgtacc
caggcgcgccagctctacggcgacgagtacgtcgcgccggcgccgcgccaatacacccgc
aaggtgaagaacgcccaggaagcgcacgaggctatccggcccgccggtgaaacgtttgcc
accccggacgcggtgcgtcgcgaactcgacggtcccaacattgatgatttccggctctat
gagctgatttggcaacgcaccgtagcctcgcagatggccgatgcgcggggcatgacgctg
agcctgcggatcactggcatgtcggggcaccaggaggtggtgttctccgcgaccggacgc
accttgacgttcccgggcttcctcaaggcctacgtggagaccgtggacgagctggtcggc
ggcgaggctgacgatgccgagcggcgactgccccatctgaccccgggtcaacggttggac
atcgtcgagttgaccccagacggccatgccaccaacccgccggcccgctacaccgaggcg
tcgctggtcaaagcgctcgaggagctgggcatcggccgcccgtcgacctactcgtcgatc
atcaagaccatccaggatcgcggctacgtgcacaagaagggcagtgcactggtgccgtca
tgggtggcgttcgcggtaaccggtctgctcgagcagcatttcggtcggctcgtcgactac
gacttcaccgcggcgatggaagacgagctcgacgagatcgccgccggcaacgagcgccgc
accaactggctcaacaacttctactttggtggcgatcacggtgtgcccgattcggtagcc
cgatcgggtggcctcaagaagcttgtcgggatcaatctcgagggcatcgacgcacgagaa
gtaaactctatcaagctttttgacgacacccacggacgccccatatatgttcgggtgggc
aagaacggtccctacctggaacgtttggtggccggcgacaccggtgagcccacgccgcag
cgggccaacctcagcgactcgattaccccggacgagctgactctacaggtggccgaagag
ctctttgccacaccgcaacagggacggactttgggcttggacccagaaaccggccacgag
atcgtggccagggaaggccggtttgggccgtatgtgaccgagatcctgccggagcctgcg
gctgatgcggccgcggccgctcagggagtcaagaaacgccagaaggccgccgggcccaaa
ccgcgcaccggttcgttgctgcggagcatggacctacagacggtcaccctcgaagacgcg
ctgaggctgctgtcactgccgcgcgtggtcggagtggaccccgcctcgggtgaggagatc
accgcgcagaacgggcgctacggaccgtatctaaagcgcggcaacgattctcgatcactg
gtcaccgaagaccagatattcaccatcacgctcgacgaagccctgaagatctacgcagag
ccgaaacgtcgtggccggcaaagcgcttcggctccgccgctgcgcgagctgggaacagat
ccggcgtcgggcaagccaatggtcatcaaggacggccgattcgggccgtacgtcaccgac
ggtgagaccaatgccagcctgcgtaagggcgacgacgtggcttccataaccgacgagcgc
gccgccgagctgttggccgatcgccgagcccggggtccggcaaaacggccagccaggaaa
gctgcccggaaggtgccggcgaagaaggcagccaagcgcgactag
DBGET
integrated database retrieval system
