Medicago truncatula (barrel medic): 112416066
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Entry
112416066 CDS
T01716
Name
(RefSeq) E3 ubiquitin-protein ligase RNF8
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
112416066
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112416066
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112416066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-rbx1
Zn_ribbon_6
zf-Nse
RING_XB3-XBAT31
Prok-RING_4
zf-RING_10
zf-RING_4
Zn_ribbon_19
Sina_RING
zf-RING_6
zf-ANAPC11
zf-RING_11
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
112416066
NCBI-ProteinID:
XP_024640609
LinkDB
All DBs
Position
5:complement(24515260..24515754)
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AA seq
164 aa
AA seq
DB search
MSDATNYRWMEVVSDIGLNRVPVVDENSIFGNTSREQDEPSTQMRHDQTLALLPMEATDD
DVIEISAKAFAKAIPNFRRNRRRTIDDVIDVYIEEEEEQHPKKPLISCPICMGPFVEEMT
TKCGHIFCKTCIKDAIKAQAKCPTCRKKITSVRQLIRVYLPTTG
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgccacaaattacaggtggatggaggttgtttcggacatcggccttaatcgg
gtacctgtggttgatgagaattcaatttttgggaatacttctcgtgagcaagatgaacct
tcgactcagatgaggcatgaccaaacactcgcactattgcctatggaggccaccgatgat
gacgttattgaaatttccgcaaaggcttttgccaaggcaataccaaatttcagaagaaat
cgacggaggaccattgatgatgttattgatgtgtatatagaggaagaagaagagcagcat
ccaaagaaacctctcatcagttgtcctatatgcatgggcccttttgtcgaagaaatgacc
acaaagtgtggccacattttttgcaagacttgtatcaaggatgcaatcaaggctcaagct
aaatgtcctacctgtagaaaaaagatcacttctgttagacagcttataagggtgtatctc
ccaacaactggttga
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