Medicago truncatula (barrel medic): 112417170
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Entry
112417170 CDS
T01716
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
112417170
Spliceosome [BR:
mtr03041
]
Common components
Common spliceosomal components
General mRNP proteins
112417170
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
112417170
NCBI-ProteinID:
XP_024628096
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All DBs
Position
1:complement(54781178..54790057)
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AA seq
482 aa
AA seq
DB search
MMEFDYLEKTVQNSDDRVHSRNSKNDDDDDDDDVDHWFKHSKSKGNGDRKRDRDRRNRGS
ESEREKERSQRRHDSRDRDREIRRHKEKKEEAAEPESDPERDQRTVFAYQISLKADDRDV
YEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSE
AEKNLVQSTASVVNGPSGNLGPYSGGARRLYVGNLHSSITEADLRRVFEAFGQVELVQMP
LDDIGHCKGFGFVQFARLEDAKNAQSLNSQLEIGGRTIKVSAVTDQSGMQEFGGNTGDID
DDEGGGLSLNASSRALLMQKLDRSGIASSMVGLLGNSVVNNTGLNLQAMGSIPAVALIPA
PGVGMPGGGLQIPMLTSPTIDTIGTPSECLLLKNMFDPEDEKEPDFDLDVKEDVEAECSK
FGNLKHIYVDKRSAGFVYLRFENTQPAISAQRALHGRWFAGKMITASFMVPQLYEDRFPD
SK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgatggaatttgattatttagagaaaactgtacaaaattctgatgatagagttcatagt
cgaaactcgaagaatgacgatgatgatgatgacgatgatgttgatcattggttcaagcat
tcaaaatctaagggcaatggggataggaagagagatagggatagaaggaatcgagggagt
gaaagtgaacgagagaaggagcgctctcagcgaaggcatgatagcagagatagagataga
gaaatcagacggcataaagaaaaaaaggaagaagcagcagaacctgagtctgatcctgaa
agagatcaaagaactgtgtttgcttatcagatttctcttaaagcggatgatagagacgtt
tatgagttcttctcaagggctggcaaggtgcgagatgttcgcttgattatggaccgcaat
tcaagacgttctaaaggtgttgggtatattgagttctacgatgtcatgtctgtccccatg
gcaatagcgctttcaggtcaacctcttcttggtcaaccagtgatggtgaagccatcagaa
gcagaaaagaatctggttcagtctacagcatctgttgttaacgggccttctggaaattta
ggcccttattctgggggtgcaagaaggctctatgttggtaatctgcattccagtattact
gaagctgatcttcgtagggtgtttgaagcatttggtcaagttgagctagtccagatgcct
cttgatgacattgggcattgcaaaggttttggctttgtgcagtttgcccgccttgaagat
gcaaaaaatgctcaaagcttgaatagccagttggagattggtgggaggacaatcaaggta
tcagctgttactgatcaatctggaatgcaagaattcggtggaaatactggtgatattgat
gatgatgaaggtggtggattgtccttgaatgcctcttcccgagcattactcatgcagaag
ttggatcgcagtggcattgcatcaagtatggttggtttgctgggaaattctgttgtcaac
aatacaggccttaatctgcaagcaatgggaagcataccggcagtagctcttattcccgcc
ccaggagttggaatgccaggtggaggtctccaaattccaatgctgacaagtcctactatt
gatacaattggcactccaagtgaatgcttattgttaaagaatatgtttgatccggaagat
gagaaggaaccagactttgatttggatgttaaagaagatgttgaagcagaatgctctaag
tttgggaacttaaaacatatatatgttgataagaggagtgccggatttgtctacctacga
tttgaaaatacccaacctgcaataagtgcacagcgggccttacatggaagatggtttgca
gggaaaatgatcactgcaagctttatggtgccccagttatatgaggatcgattcccagac
agcaaatga
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