Medicago truncatula (barrel medic): 112420007
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Entry
112420007 CDS
T01716
Name
(RefSeq) zinc finger protein JACKDAW-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
112420007
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112420007
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Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
112420007
NCBI-ProteinID:
XP_024634319
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Position
1:complement(32416456..32419236)
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AA seq
500 aa
AA seq
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MQMIPGDPFSLSTSLGGFTTQEQNTNPNPKPNAPSVPKKKRNLPGTPDPDAEVIALSPKT
LMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKDVIKKKVYICPEKTCVHHD
PSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFS
RKDSFITHRAFCDALAEESARVTSVTTTNLNFKNEEGSAMMNPHSHSQHGLSHGILQNIG
GIPHPQFGSHGFHHVDFNGIGNKNTMIMEQQRPSLSLWLNQGNHEMGQSSNSLFGSSGLS
EIVQMGNAATNNNNNNALICSSSSSMFGIPASNSTSAANLSLSKPASSGSVTVSATPMSA
TALLQKAAQMGSTRSNTSNDNNNPSIFSSSFGVMTSPSSSTSSAMLGNSSAGAAANANYS
SNSSFDQFFMHGPQSDQQGKLNIMHHGGSGSGSNSMDQVQHSNLTRDFLGVSGGGRTGPP
QFLPQEIAKFASSIQFTGNQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgattcctggtgaccctttttcactatccacttcacttggagggtttactact
caagagcaaaacacaaaccctaaccctaaacctaatgctccttctgtccccaagaagaag
agaaatcttccaggaacaccagatccagatgccgaggtcattgctctctcaccgaagaca
ctcatggcaacaaacagattcatctgtgaaatatgcaacaaagggttccaaagagatcaa
aaccttcaactacatagaagaggacacaaccttccatggaagcttagacagagatccaac
aaagatgttatcaagaagaaagtttacatctgtccagagaagacctgtgtccaccatgac
ccttcaagagcacttggtgacctcacaggtataaaaaagcactttagtagaaagcacggt
gagaagaagtggaaatgtgaaaaatgttccaaaaaatatgcagtccaatctgattggaaa
gctcatacaaaaacatgtggtacaagagaatacaaatgtgactgtggcaccctcttctca
agaaaggatagtttcattacacatagagccttttgtgatgcattggcagaagagagtgca
agagtaacttcagttacaacaacaaatctaaattttaagaatgaagaaggtagtgctatg
atgaatccacattcacattcacaacatggtttatcacatggaatacttcaaaatataggt
ggaattccacatccacaatttggctcacatggatttcatcatgtagatttcaatggaatt
ggaaacaaaaacactatgattatggagcaacaaaggccaagtttatcactttggttaaac
caagggaatcatgaaatgggacaaagttctaattccctttttggttcttctggtttatct
gagatagttcaaatgggaaatgctgctactaataataataataataatgccttgatttgt
tcttcttcatcatcaatgtttggtatacctgcttcaaattcaacatctgctgcaaatctt
tctctatcaaaacctgcttcttccggttctgttactgtttctgctacaccaatgtcagct
actgctcttctgcaaaaagcagctcaaatgggttcaactagaagcaatactagtaatgat
aataacaacccttccatttttagttctagttttggtgtaatgacatcaccttcttcttct
actagttcagctatgttgggaaatagtagtgcaggtgcagctgctaatgctaattatagc
tcaaatagtagttttgatcaattttttatgcatggaccacaaagtgatcaacaagggaaa
ttgaatattatgcaccatggtggttctggttctggttcaaactctatggatcaagtacaa
catagtaatttgacaagagattttcttggtgtgagtggtggaggaagaactggtccacct
cagtttctacctcaagagatagcaaaatttgcttcttccattcaattcacaggtaatcag
tga
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