Medicago truncatula (barrel medic): 112421324
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Entry
112421324 CDS
T01716
Name
(RefSeq) zinc finger protein MAGPIE
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtr03000
]
112421324
Transcription factors [BR:
mtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112421324
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_STOP2_C
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
112421324
NCBI-ProteinID:
XP_024638423
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All DBs
Position
4:complement(38472534..38475031)
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AA seq
500 aa
AA seq
DB search
MFESNKFKMLKNMDEVEITNANFPQNPTMSASNNPPALKRKRNLPGNPDPEAEVIALSPK
TLMATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEIKKRVYVCPEKTCVHHD
PSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFS
RRDSFITHRAFCDALAEETARVSAASEINNSSLLRGNIGNYTNIMGTTSLVPNNNMPNHF
PSIFKPISTPDHHHHHHHESTNQTRGLSLWMNQTSHSQPHETMITTTNGNSSLHEIQQQL
DSSSREIMYGGNENPPPYSNNYQLNWVFGTKLSNNCSQELITSTTTSLPLGNINVNVKDV
SHDATSQQISSLYSSQHQISHQTSSANMSATALLQKAAQIGSTSTDTSFLGSLGLKCSNN
NSTNDVNKFGGTGMYGTSSSLLISLGNEEDHNNACDFSQMHPSKRRHVQGEENGGGGQTR
DFLGVGVQTICHPSSINGWI
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagtcaaacaaatttaagatgctaaaaaatatggatgaagtagaaatcacaaat
gctaatttccctcaaaatccaacaatgagtgcttctaataatcctcctgctttgaagaga
aaaagaaaccttccaggaaatccagatcctgaagcagaagttatagctttatcaccaaag
acactcatggctacaaacagattcttgtgtgaaacatgtgggaaaggttttcaaagagat
caaaatcttcaactgcatagacgtggacataatcttccatggaagcttaagcagagaaca
aacaaagaaataaagaagagagtttatgtgtgtccagagaaaacttgtgtccaccatgat
ccttcaagggcacttggtgacttaactgggataaaaaagcacttttgtagaaagcatggt
gaaaagaagtggaagtgtgagaagtgctcaaaacgttatgctgttcagtcagattggaaa
gctcactcaaaaacatgtggtactagagaatacaaatgtgactgtggaactatcttttca
aggagagacagcttcataactcacagagccttttgtgatgccttagcagaagaaacagca
agggtaagtgcagcatcagaaataaacaacagctcattattaaggggtaacattggtaat
tacaccaacataatgggaacaacatctctagtccctaacaataacatgccaaaccatttt
ccttcaattttcaaaccaatttcaactcctgatcatcatcatcatcatcatcatgaatca
accaatcaaactagaggactatccctttggatgaatcaaacttctcattctcaacctcat
gaaacaatgataaccaccaccaatggaaattctagtttgcatgagattcaacaacaactt
gactcatcatcaagagaaattatgtatggtggaaatgagaaccctccaccatattctaat
aattatcagctaaattgggtttttggaactaaactttcaaacaattgcagccaagaatta
attactagtactacaacttcacttccactaggaaacattaatgttaatgttaaggatgtt
tctcatgatgctacaagtcaacaaatttcttccttgtacagctcacaacaccaaatatca
catcaaacatcttcagcaaacatgtcagctacagctttgttacaaaaagctgctcaaatt
ggatcaacttcaactgatacatcattccttggaagtttaggtttgaaatgcagtaataat
aatagtactaatgatgtgaacaagtttggtggtactggtatgtatggtacttcaagttca
ttactcattagtcttggcaatgaggaagatcataataatgcatgtgatttttcacaaatg
cacccttctaaacgtagacatgtgcaaggtgaagagaatggaggaggagggcaaactagg
gattttcttggtgttggtgtgcaaaccatttgtcacccttcatcaatcaacggttggatt
tga
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