Medicago truncatula (barrel medic): 112421393
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Entry
112421393 CDS
T01716
Name
(RefSeq) LOW QUALITY PROTEIN: protein RDM16
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112421393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
112421393
Spliceosome [BR:
mtr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
112421393
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
112421393
NCBI-ProteinID:
XP_024638798
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Position
4:complement(45712379..45714502)
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AA seq
524 aa
AA seq
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MEYSVETRYSLHKRKDREHSEDRELDDKIIRVSEAKKERRRFGDKLGSLSSSDALAKAKK
ALQIQKLLSEKLKKIPQLNKRTKAPFLRLDAQGREIDEHGNVVNVTKPSNLSTLKVNINK
QKKDAFEILKPVLDVNPESNPHFDERMGIDKTKLLRPKRMNFLFVEEGKWSRDAESIKWK
SKFGEAQAKEQKDKQAQLAKAKAAPDINPNLIEITERVAMKAKLKDPIPDIGWWDVELLH
SGNYGDIANGTIDEGNMKMEEFNFYVETPRPIEPPAEPAPPPPQLIKPTKQEQKKLRTQR
RIAKEKKRQEMIRQGFIEPPKPKVKMSNLHKVLGTEATQDPTRLEKEVRNAAAEREQAHI
DRNIAHKLTPAELREKKERKLFDDPNTLDTLVSLYRVNDLSHHKARFRVYANAQENRLTG
CAVICDGISVVVVEGGSKSIKRYGKLMLRRIKWRDVSKEKEDNEDSGDANKCVLVWQGSV
AKSSFNRFSVHDCITEAAARKVFVDAGVLHYWYQAVNYTDDDAV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggagtattcagtggaaactcgatactccttgcataagaggaaagatagagaacatagc
gaggatagggaattggatgataagataattagggtttctgaagcaaagaaggaacgtagg
agatttggtgataaacttggaagcctctctagtagtgatgccttagcaaaggctaagaag
gctttacaaattcagaaattgttgtcagagaagctgaagaaaattcctcagttgaataag
agaaccaaagctccttttcttcgtcttgacgcccagggacgtgaaatagatgaacatgga
aatgttgttaatgtaactaagccaagcaaccttagcacattaaaggtcaacattaataaa
cagaagaaagatgcatttgaaatactaaaacctgtattggatgttaatcctgaatctaat
cctcattttgatgaaagaatgggtatcgacaaaacaaagctcctgcggcctaagaggatg
aattttctgtttgtggaggaaggaaaatggtcaagagatgctgaatcaataaaatggaag
agtaaatttggagaagctcaagcaaaagaacagaaggacaaacaagcacagctagcaaag
gcaaaggctgctcctgatatcaatccgaacttaatagaaattacagagagagttgcaatg
aaagcaaaactgaaggacccaattccagatattgggtggtgggacgtggaacttctgcat
tctggaaattatggcgacattgccaatggtactatagatgaaggcaatatgaaaatggaa
gaattcaacttttatgtggaaactcctcggcctattgaaccgcctgctgagcccgcccct
ccaccacctcaacttatcaagccaactaaacaggagcagaagaaactaaggacccaaagg
cgtatagctaaggagaaaaagcgacaggagatgattagacagggtttcatagaaccgcca
aaaccaaaggtcaagatgagtaatttacataaggtactagggactgaagcaactcaagat
cccacccggcttgaaaaggaagtacgtaatgcagctgccgagcgtgagcaggctcacata
gataggaatattgcacacaagcttactcctgctgagctgcgtgagaagaaggaaaggaag
ttgtttgatgacccaaatacattggacacacttgtctcactttacagggtaaatgacctt
tctcatcacaaagcccgctttagagtttatgctaatgctcaagaaaatcgtttgactgga
tgtgcggtgatttgtgatggtattagcgttgtcgtggttgaaggtggaagcaagtcaatt
aagaggtatgggaaacttatgcttagacgtattaaatggcgtgatgtttcaaaagagaaa
gaagataatgaagattcaggcgatgccaataaatgtgttctggtgtggcaaggaagtgtt
gccaaatcgagcttcaataggttcagtgttcatgactgcatcactgaagcagctgctcgt
aaagtttttgtggatgctggggttcttcattattggtaccaagctgtcaactatacagat
gatgatgctgtttga
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