Medicago truncatula (barrel medic): 112421400
Help
Entry
112421400 CDS
T01716
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112421400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
112421400
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112421400
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112421400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
112421400
NCBI-ProteinID:
XP_024638824
LinkDB
All DBs
Position
4:complement(836966..838359)
Genome browser
AA seq
277 aa
AA seq
DB search
MPLILPQNDDSIQIREVWSDNLEEEFAVIREIVDDYPFIAMDTEFPGIVLRPVGNFKSNY
DYHYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGEDDRFCIWQFNFREFNVNEDVFANDS
IELLRQSGIDFKKNNEDGIDARRFGELLMSSGIVLNDNVHWITFHSGYDFGYLLKLLTCQ
NLPDTQVGFFNLINMYFPMLYDIKHLMKFCNSLHGGLNKLAELLEVKRVGICHQAGSDSL
LTSSAFRKLKENFFSGSLEKYAGVLYGLGVENGQSTH
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccgctaattttacctcaaaacgacgattcgattcagatccgtgaagtttggagcgat
aaccttgaagaagaattcgctgtgattcgagaaattgttgatgattatcctttcattgct
atggatacggaattccctggtattgttcttcgacctgttgggaatttcaagagcaattat
gattatcattaccaaaccctaaaagataatgttgatatgttaaagcttattcaattgggt
cttactttttctgatgagcatggaaatcttccaacttgcggcgaagatgataggttttgt
atctggcaattcaattttagagaatttaatgttaacgaggatgtttttgcaaatgattca
attgagcttttgagacaaagtggaattgatttcaagaagaataatgaagatggtatcgat
gctaggcgtttcggtgagcttttgatgtcatctgggattgttttgaatgataatgttcat
tggataacttttcatagtggatatgattttggttatttgttgaagttgttgacttgtcaa
aatttgccggatacacaagttgggttctttaatttgattaacatgtatttccctatgctg
tatgatatcaaacatttgatgaagttttgtaatagtcttcatggtgggttgaataagctt
gcagagttgttggaggttaagagggttgggatttgtcatcaagcgggttcggatagttta
ctcacatcttctgcattcaggaaattgaaagagaatttctttagtggatctttggagaaa
tatgcaggggtcttgtatgggttaggtgttgagaatggacagagtactcattaa
DBGET
integrated database retrieval system
