KEGG   Medicago truncatula (barrel medic): 112422097
Entry
112422097         CDS       T01716                                 
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mtr04121]
    112422097
Enzymes [BR:mtr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112422097
Ubiquitin system [BR:mtr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112422097
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-Nse Zn_ribbon_19 zf-rbx1 Prok-RING_4 zf-RING_10 Zn_ribbon_6 Dbl7 TerY_C zf-RING_4 zf-ANAPC11 zf-RING_11 Zn_ribbon_8 Lar_restr_allev TRAF3_RING Sina_RING
Other DBs
NCBI-GeneID: 112422097
NCBI-ProteinID: XP_024640611
LinkDB
Position
5:complement(24532501..24533465)
AA seq 164 aa
MTISSMNDLIYVRTRAVSNIVINRIYAADENPSGEQDGPQAKLGHVLQRHAFFSMEAIDD
VDDDVVEISARDFAEAKKNSRRNRLRTIDDLIDVHLDEEQPSKKIVLSCPICMGPFVEEM
TTRCGHIFCKICIKIAINAQAKCPICRKKTNVKQLIRVFLPTTD
NT seq 495 nt   +upstreamnt  +downstreamnt
atgacgatttcttcgatgaatgatctaatttacgtgcggacgagggcagtttcgaacatt
gtcattaatcgaatatatgcggctgatgagaacccttctggtgagcaggatggacctcag
gctaaattggggcatgtccttcagagacatgcattcttttctatggaggccattgatgat
gttgatgacgacgttgttgaaatttctgcaagggattttgccgaggctaaaaaaaattct
agaagaaatcgcctgaggaccatagatgatcttattgatgtgcatttagacgaagagcag
ccttcaaaaaaaattgtcttaagctgtcctatatgcatgggccctttcgtcgaagaaatg
acgacaaggtgtggtcatattttttgcaagatttgtatcaagattgctatcaatgctcag
gctaaatgtcctatctgcagaaaaaagacgaatgtgaaacaacttataagagtgtttctc
ccaacaactgattga

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