Medicago truncatula (barrel medic): 112422652
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Entry
112422652 CDS
T01716
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112422652
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mtr04040
]
112422652
Ion channels [BR:
mtr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112422652
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
112422652
NCBI-ProteinID:
XP_024641737
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Position
6:35599414..35607752
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AA seq
762 aa
AA seq
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MNHFDKDEIPILSETRGQRSDDPQDSTFRRNISRTRSASISIPMASLDPYERQPNLVGHT
GPLRTTRKTPVSQMSGPLYVSPATGNTFQNNIMVAGNKVGENKTEKFSTFDGTDKNEHLL
RSGQLGMCNDPYCTTCPTYFKVAQQRKPRASTIFDPKFHNSLYGDAKGYGRKFFSFCNSC
IPGVMNPHAKVVQQWNKVLAIFCLVAIFVDPLFFFLLYVEEKNKCIRINHAMATTLVVLR
SITDVVYLLNILLQFRLAYVSPESRVVGAGDLVDHPKKIAVNYFKSYFLFDLFVVSPLPQ
IMILFILPTSLGISGANYAKNLLRLGILIQYIPRLFRFLPLLIGQSPTGFIFESAWANFI
INLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACHNAKLLGCMELIDCNSKSSNLSVTWSQ
DQGAKDCFNSSSGAFAYGIYNAAVLLTIETRVVNKYVYALFWGFQQISTLAGNQEPSYFV
WEVLFTMSIIGLGLLLFALLIGNIQNFLQALGRRRVEMQLRGRDVEQWMNHRRLPEDLKR
RVRQAERYSWAATRGVPEKMVLENLPEDLQTDIRRHLFKFVNKVRIFAHMAEDEPILDAI
RERLIQTTYIKGSKILSQGGLVQKMVFIVRGKLESVGEDGIPVPLSEGDACGEELLRWYL
EQSSESKEGKKIKLHGQGLTSDRTVRCLTNVEAFSLRAKDIEEVTTLFARFLRSPRVQGV
IRYESTYWRSLAANRIRVAWRYRKKRLSKANTTQNDYQTLMP
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaatcattttgacaaagatgaaattccgatactgtcagaaacacgtggacaacgatct
gatgaccctcaggactctacctttcgaagaaacatatcgaggacacggagtgcttcaatt
tctattcctatggcttctctagatccatacgagagacaaccaaatcttgtcggacatact
ggtccgcttcgtaccacgaggaaaactcctgttagccaaatgagtggtccattatatgtt
tctcctgcaactggaaatacttttcagaataatataatggtggcaggaaacaaagtaggg
gagaacaagacagagaagttttctacatttgatggcacggataaaaatgaacacttgtta
aggtctggacaactaggaatgtgtaatgatccttattgtactacttgccctacttacttc
aaagttgctcagcaaagaaaaccaagagcttccactatatttgatcccaagttccacaat
tctctatatggcgacgccaaaggttatggaaggaaatttttttctttctgcaattcatgt
attcctggagttatgaaccctcatgcaaaagttgtacaacaatggaacaaggttttggcc
atattttgcttggtcgcaatttttgttgatccgttattttttttcttactctatgtggag
gagaaaaataaatgtattcgaatcaaccacgcaatggcaacaacacttgttgtacttaga
agcataaccgatgttgtgtatctcttgaacattcttctccagtttaggttggcttatgtt
tctcctgagtcaagggttgttggtgctggggatttagttgaccatcccaagaaaatagct
gttaattactttaagagctactttctcttcgacttatttgttgtatcacctcttcctcag
ataatgatactatttatcctaccaacttccttggggatatcaggagcaaattatgccaag
aatcttctacgtctaggaatccttattcaatatattcccagattgttcagatttttgcct
ctgctaattggtcagtctccaactggattcatattcgagtcagcctgggcaaatttcatt
ataaatcttctgatttttatgctatccggccatgttgttggttcatgctggtatctcttt
ggcctacagagggttaaccaatgtttgcgtgatgcctgccataatgctaaactacttgga
tgcatggaattgattgattgtaattctaaatcgtcgaatttatcagttacatggagccag
gatcagggcgccaaagattgtttcaattcttcatctggtgcttttgcttatggaatttat
aacgctgctgtactacttacgatagaaactagggtggtcaacaaatatgtgtatgcactc
ttttggggatttcagcaaatcagtactctagctggtaatcaagaaccaagctattttgtg
tgggaagttctttttacaatgtccatcataggattgggactcttgctttttgcgcttctc
attggaaacatacagaactttcttcaggctcttggacggaggagggtagaaatgcaactt
agaggccgtgatgttgagcaatggatgaaccatcgtcgcttaccagaagatcttaaaagg
agagtacgtcaggctgaacggtatagttgggctgcaacaaggggtgttcctgagaaaatg
gttctggaaaatttgccagaagatctccagacagacataagacgccatctcttcaaattt
gttaataaagttcgaatttttgcccatatggctgaggatgaacctatcttagacgccatt
cgtgagagactaatacagacgacatacattaaaggaagtaaaattctcagtcagggtggt
cttgtacagaaaatggtgtttattgtgcgtggaaaattggagagcgtcggagaggatgga
attccggttccgttatcagaaggggatgcttgtggtgaagaacttctaagatggtatctt
gaacagtcttctgaaagcaaagaaggtaaaaaaataaagcttcacggccagggtttgact
agcgacagaacagtaagatgcttaaccaatgtggaggcattttcacttcgtgctaaagac
attgaagaagtcacaactctcttcgcaagatttttgcggagccctcgtgttcaaggagtt
ataaggtatgaatcaacttactggagatcacttgcagcaaatagaattcgggttgcatgg
agatacaggaagaaacgtctaagtaaagctaataccacacaaaatgattatcaaacattg
atgccatag
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