Medicago truncatula (barrel medic): 11405306
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Entry
11405306 CDS
T01716
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
11405306
Membrane trafficking [BR:
mtr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
11405306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
11405306
NCBI-ProteinID:
XP_003628402
UniProt:
G7LB13
LinkDB
All DBs
Position
8:19135310..19157795
Genome browser
AA seq
1836 aa
AA seq
DB search
MLHLRHRRDSTPATTKWRNKFDENLEQWPHLNELVHCYTTDWVKDENKYGHYESIGTPSF
SNQIYEGPDTDIETEMRLAGARRTKGEDISEDDIPSTSGRQFMEAADGEHSDVPKHFGQS
PLPAYEPAFDWENERSLIFGQRIPETPITHGMKISVKVQSLQFQAGLSEPFYGTICLYNR
ERREKLSEDFYFHISPTEMQDAKITCEPRAIFYLDAPSASVCLLIQLEKHATEEGGVTPS
VYSRKDSVHLTEREKQKLQVWSQIMPYKESFAWAIVSLFDGSIGAASVGPASPSSPLAPS
VSGSSSHEGVFETNTKVSLDGKLSYSNGNSVVVEVSNLNKVKESYTEESLQDPKRKVHKP
VKGVLRLEIEKHQISQADLENISECGSATNDSVDPGDRIADSMSGKYPSNGCDDPQGSIS
RWNISDAKEVFGNGANHHGNSDFNADDFHAFDFRTTTRNEPFLQLFHCLYVYPLTVSLGR
KRNLFIRVELREDDGDIRRQPLEAIYPRDPGVETSFQKWGHTQVAVGARVACYHDEIKLS
LPAMWTPMHHLLFTLFHVDLQTKLEAPKPVVIGYAALPLSSHAQLRSEINLPILRELVPH
YLQDAGRERLDYLEDGKNVFRLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELL
EAINSLKNVDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRVQQESVDDAE
RNHFLVNYVDCAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLE
LIVKSMALEKTRLFYHSLPIGEDIPPMQLKDGVFRCIMQLYDCLLTEVHERCKKGLSLAK
RLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHECKLTFLQIICDHDLFVE
MPGRDPSDRNYLSSVLIQELFVTWDHEDLSLRAKAARILVVLLCKHEFDVRYQKPEDKLY
IAQLYLPVIGQILDEMPVFYNLNSVEKREVSIVILEIVRNLDDASLVKAWQQNVARTRLF
FKLMEECLLLFEHKKPSDGMLLGSSSRNPVGETPASPKYSERLSPAINNYLSEASRQEVR
PQGTPDNGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHPLLRQKLEL
WEENLSASVSLQVLEVTKKFSVMAASQSIATDVGKLDCITAVFMSFLSRNQPLSFWKAFF
PVFNSVFDLHGATLMARENDRFLKQVTFHLLRLAVFRNDNIRKRAVVGLQILVRCSFHHF
TQTARLRVMLIITLSELMSDVQVTQMRSDGSLEESGEARRLRKSLEEMKDETKSSFLLEE
CGLLENALVAIPEKKAENRWSWSEVKYLSDSLLLALDGSLEHALLAPVMTMDRYAAAESF
YKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVARKDGVWNRD
HVAALRKICPMVSSEITCEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELFHFCAS
ILELVIPVNKSRRAYGQLAKCHTLLTNIYESILEQESSPIPFTDATYYRVGFYGDRFGKL
DKKEYIYREPRDVRLGDIMEKLSHIYESRMDGDHTLHIIPDSRQVKAEELQPGVCYLQIT
AVDAVMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKNQGGLEDQWKRRTVL
QTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQS
LQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHF
RLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatctccgtcaccgtcgtgattctactccggccactacaaaatggcggaacaag
tttgatgagaatttggagcaatggccgcatctgaatgagcttgtacattgttacactacg
gattgggttaaggatgagaacaaatacggtcattatgagagtattggaacgccgtcgttt
tctaatcagatttatgaggggcctgatactgacattgaaactgaaatgcggcttgctggt
gcgagaagaacgaagggtgaagacattagcgaagatgacatccctagtacttcgggaagg
cagtttatggaagctgcagatggtgaacattcagatgttccaaagcattttggtcaatct
ccccttcctgcttatgagccggcatttgattgggaaaatgagaggtcattgatatttggg
caaagaataccggaaactcctataacacatggaatgaagatttccgtaaaggttcaatct
ttacaatttcaggcaggattgtctgagcccttttacggtacaatttgcttatacaatagg
gagagaagagagaaattatcggaagacttttactttcatatctcaccaaccgaaatgcaa
gatgccaaaattacctgtgaaccccgcgcaattttttacttagatgcgccatctgcttca
gtttgtttgttaattcagttggagaagcatgctactgaagaaggcggagtcactccttct
gtttattctcgtaaagattcggtgcatttgactgagagagagaagcaaaaattgcaggtg
tggtctcaaatcatgccttacaaagagtcattcgcatgggccattgtgtcgctatttgat
ggcagtattggtgcagcttcggtagggcctgcttccccaagcagccctcttgctccaagt
gtatctggttcaagttcgcatgaaggtgttttcgagactaatacaaaagtctcgttagat
ggaaagctgagttactcaaatggaaattctgttgtagttgaggtttcaaacttaaataaa
gtcaaagaaagctatactgaggaatcacttcaggatcccaagcggaaagtgcataaacct
gtcaaaggagttctgagactggaaattgaaaagcaccagatttctcaagctgatttggaa
aacatatcagaatgtggcagtgcaaccaatgattctgttgatcccggggatcgcatcgct
gattccatgtctggaaagtatcctagtaatggttgtgatgatcctcagggtagtatctcc
aggtggaacatcagtgatgcaaaagaagtttttggcaatggagcaaatcatcatggaaac
tcggattttaatgctgatgatttccatgcttttgacttccgcacaacaacaagaaacgag
ccttttttgcaactttttcactgtctctatgtgtatccgttgactgtaagtttgggtagg
aaaagaaatttgtttatacgggttgaactcagagaggacgatggtgatattcgcagacag
ccattggaggcaatttatcctagagatccaggtgttgagacatcatttcagaaatggggt
cacacccaagttgctgttggggctagggttgcttgctaccatgacgaaattaaactttcc
cttcctgccatgtggacaccaatgcaccaccttctttttactttatttcacgttgatctg
caaacgaaattggaagcaccaaagccagtggtaattggatatgcagcacttcctttatcg
tcacatgctcagttgcgttcggaaatcaatctcccgattttgagagagttggtcccgcat
tatctccaggatgcaggacgggagagattggattatttggaagatgggaaaaatgtcttc
agactgcgtttacggttatgttcttctttataccctatcaatgaacgtattagagacttt
tttctcgaatatgatcgacacactcttcgaacaagtccaccttggggttctgaactgcta
gaggctattaatagtttgaagaacgttgattctactgctttacttcagtttcttcaccca
attcttaacatgctgcttcatcttattggcaatggtggagaaacactccaggttgcagct
ttccgggctatggttaatattgtaactagggtgcagcaggagtcggttgacgatgctgaa
agaaatcattttctagtcaactatgttgattgtgctttcgatgactttgggggtcgtcaa
ccaccagtatatcctgggttatctactgtttggggaagtctggcacgaagtaaggctaaa
gggtatcgtgttggaccagtgtatgatgatgttttggcaatggcatggttttttctggag
ttgattgttaaatcaatggcattggagaagactcgcctcttctatcatagccttccaata
ggtgaagatatcccaccgatgcagttgaaggacggtgtattcagatgcataatgcagttg
tatgattgccttctcactgaggtgcacgagcgctgcaagaagggtttaagcttggcaaag
cgcttgaacagtagtctggccttcttttgttatgaccttctatcaattattgagccacga
caagtttttgagttggtatcattatatctcgataagttctctggtgtatgtcaatcagtt
cttcacgagtgcaaacttacctttcttcaaataatctgtgaccatgatctttttgttgaa
atgcctgggagagacccttcagataggaactatctttcctctgtcttgatacaagaactc
tttgttacttgggatcatgaagatttgtctctacgggcaaaggcagcaagaatattggta
gtgctcttgtgcaaacatgagtttgatgtgagataccaaaagcctgaagataagttgtat
attgctcagctatatttgccggttattggacagatattagatgagatgcctgttttctac
aacctgaattctgttgagaagcgtgaagtttccattgtaattctagaaatagttcgaaat
cttgatgatgcatcactggtgaaggcatggcagcaaaacgttgcccggactagattgttt
ttcaagctcatggaggaatgcttactgctatttgagcacaaaaaaccttctgatggcatg
ttacttggctctagttctcgcaatcccgtaggggagacacctgcttcccccaaatactct
gagagactttctcccgcaatcaacaattatctatctgaggcctcaaggcaagaagtcagg
cctcagggaacacctgataatggatatttatggcagagagtaaattcccagttaagctct
cctagccagccatattccttgagagaagctcttgcccaagcacagtcatctaggattgga
gcttctgctcaagcacttcgagaatctttgcacccacttttgaggcaaaaattggagcta
tgggaagaaaatttgagcgcttctgtcagtcttcaggtcttggaagtgactaaaaagttt
tcagtgatggcagcatcacagagcattgctactgatgttggaaaacttgattgcatcacg
gctgtattcatgagctttctatctagaaatcagccattgtctttttggaaagcatttttt
cctgtatttaacagtgtgtttgatttacatggggcaactctaatggcaagagaaaatgat
cgttttctaaagcaagtcactttccatctcctccggcttgcagttttcagaaacgacaac
atcaggaaaagggcagttgttgggcttcaaatacttgtgaggtgttcatttcatcacttt
acacagacagcaaggttaagagtcatgttgatcatcactttatcggagttaatgtctgat
gtgcaagtgactcaaatgagatctgatggtagcctagaagagagtggtgaagcacggaga
cttagaaaatccttagaggaaatgaaagatgaaactaaaagttctttcctattggaggag
tgtgggttacttgagaatgctcttgtagccataccagaaaaaaaggcagagaatagatgg
tcctggtcagaggtgaaatatctctctgacagtcttctcttagccctggatggtagcttg
gaacatgcactattggcccctgtaatgactatggatagatatgcggcagctgagagcttc
tataaactggcaatggcatttgctccagtccctgatcttcacataatgtggttacttcat
ctatgtgatgcacatcaggaaatgcagtcatgggctgaagccgctcaatgcgccgttgcc
gttgctggtgttgtaatgcaggcccttgttgccagaaaggatggtgtttggaacagagac
catgttgctgctctacgtaagatttgtcctatggttagcagtgagatcacgtgtgaagca
tctgctgcagaggtagagggatatggtgcatcaaaactgacagttgactctgctgtgaaa
tacttgcagcttgctaataagcttttttcacaagctgagctatttcatttctgtgcaagc
attctggaactcgtaatcccagttaacaagagcagacgggcttatggacagctggctaaa
tgtcatactttacttactaatatctacgaatcaatacttgaacaggaatctagtccgatt
cctttcactgatgcaacatactatagggttggattttatggtgatagatttggaaaactt
gacaaaaaggagtatatatatcgtgaacctcgtgatgtacgtcttggggacataatggaa
aaacttagtcacatatatgagtccagaatggatggtgatcacactttgcatattattcca
gattctagacaagtgaaggcagaagagttgcagcctggtgtctgctaccttcagattact
gctgttgatgcagtcatggaagatgaggatttaggaagtagaagagagagaattttctct
ctttctactggaagtgttcgtgcccgtgtgtttgaccgatttttgtttgataccccattt
acaaaaaatggcaagaatcaaggtggactggaagatcaatggaagcgacgcactgttctt
cagactgagggttcatttccagctttagtaaataggctattggtaatcaaatccgagtct
cttgaattttcacctgtagaaaatgccattggaatgattgaaacacgaacagctgcatta
agaaatgagcttgaagagcctcgaagttctgaaggggatcaacttccaagacttcaaagt
ctacaaagaatcctccaaggcagcgttgcagtacaagtaaatagtggagttttgagtgtt
tgcacagccttcttgtctggagagccagctacaagattgcggtcacaggaacttcagcaa
ctgatagccgcccttcttgaattcatggccgtttgcaaacgagccatccgggtacatttc
agattaataggtgaggaagatcaggatttccatacccaacttgtaaatggatttcagtct
ctaacagcagagttatcacattacattcctgccattctctcagagctatga
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