Medicago truncatula (barrel medic): 11405494
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Entry
11405494 CDS
T01716
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mtr01002
]
11405494
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11405494
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
11405494
Peptidases and inhibitors [BR:
mtr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
11405494
Ubiquitin system [BR:
mtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
11405494
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
11405494
NCBI-ProteinID:
XP_003613074
UniProt:
G7JXP7
LinkDB
All DBs
Position
5:complement(13805905..13814884)
Genome browser
AA seq
943 aa
AA seq
DB search
MVVFEILGFQGLVYLLLVLGFVVIRYVWRNAEEKREEVMRLVQDTTASMTHMEAYSDSDE
ISFSPSNSASFESSNSVSFSHGYQCAVCYSPTTMRCARCKAVRYCSGKCQISHWRQGHKD
ECCPSITTTREVNNENVTSRASASGTEFDLHESKGNHVSVGSYNDSHSNINPSVAARESL
DDNRHETHDSFTKPVSDNTANDTSVASTDNDGTVLHSSFPLESKNPVNIEVKNSSSSKRS
KKKSSNTTDETGFESKVPKAKSDTYHDEASKWGGHQHKRRVSFVEKPITDTSKCRTVPSL
SNSNTDVLADNVEESHLSRYKEARRSSCSSRDRISSTTKEDLISHSKSTKTDNYHALPSK
VSVVPNLQQNVRNGLKTSMQKVVQQFRSSKESRSNLTSVENELGFPYELFVELYCYDKVK
LFPFGLTNCGNSCYANAALQCLAYTQPLTSYLLQGFHSKRCQKKGWCFMCEFEYLIQKAK
EGTSPLSPIGILSKIHKIGSHLGHGREEDAHEFLRGAVETMQYICLKEAGVSSPLTEETT
LIGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIETLEEALGQFTAPEILDKDN
KYNCGRCKSYEKAKKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLDMTPYMSGR
KDKSPFYSLYAVVVHLDIMNASFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSESAY
MLLYARHSPKPLGSVSSNATFSTGKFKRRSLEAIPAVSKTRSNSMATNADSPSVQQKQGQ
HSHRNAVDDSFSNESVPEEWRFNYRGRNTMVDSASESSVFSSSDASSCSTASTKDSASTA
DFSDYIFGEAGSNWHGQYGISSNSAASSSYDNLHTDFSVDNDADRRLQQNSEDKAILYAN
KNKNHSGRWGIDLKKFVTAKHHDKSSAVHVRRTSRDASAQTFY
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgtttgagattttagggtttcaaggtttggtttatttgctgttagttttgggt
tttgtggtgattcgttatgtttggagaaatgctgaagagaagagagaagaggttatgagg
ttggtacaagatactactgcttctatgactcatatggaagcttattctgattcagatgaa
atttcattttcaccttcaaattcagcttcttttgaatcatccaattcagtttcattttct
catgggtatcaatgtgctgtttgttattctcctaccaccatgcgttgtgctcgctgcaaa
gctgttagatactgttcgggtaagtgtcaaattagtcactggagacaaggtcacaaggat
gaatgttgtccttcaattaccaccaccagggaggtcaacaacgagaatgttacatctagg
gcatcagcatcaggaacagaatttgatcttcatgaaagcaaaggaaatcatgttagtgtt
ggatcttacaacgattcacattccaacattaatccttctgttgctgcaagagaatcattg
gatgataaccgtcacgagactcatgactcatttacgaaacctgtcagtgataatactgct
aatgacacatctgtagcttccaccgacaacgacggaaccgtgttgcactcctcatttcct
ttggaatctaaaaatcctgtcaatattgaagttaagaattctagttcaagtaaaagaagc
aagaaaaagtctagcaacactaccgatgagactggatttgaatcaaaagttccaaaagct
aaatccgacacatatcatgatgaggcatcaaagtggggtggccatcaacacaaaagaaga
gtttcatttgttgaaaaaccaataacagatacttctaagtgcaggactgtgccttccttg
agtaattcaaataccgatgttctagctgacaatgtggaagaatcgcatttgtccaggtac
aaagaagcacggagatcatcatgtagttctcgtgatcgaatatcttcaactactaaggag
gatttgatttcacattccaagtctacgaaaactgacaattatcatgccttgccttcaaaa
gtcagcgttgttccaaatcttcaacaaaatgttcgtaatggtttgaaaacatcaatgcag
aaagttgtccagcagtttagaagctcaaaagagtcaagatccaatctaacatctgttgaa
aatgagttgggctttccttatgaacttttcgtggaactttattgttatgacaaggtgaaa
ctatttccctttggccttacaaactgtgggaacagctgttacgctaatgcagcactccaa
tgcttggcgtatactcagcctctaacatcgtatcttttgcaagggttccattcgaaacga
tgtcagaagaagggatggtgttttatgtgcgagtttgaatatctaattcagaaggcaaaa
gaagggacgtctccactttctccaattgggatattatctaagatacacaagattggaagt
catcttggacatgggagagaggaagatgcacatgaatttttgaggggtgcagttgagact
atgcaatatatttgcctcaaggaagccggtgtatcaagtcctttgacagaagaaacaact
ctcattggatacacttttggaggatatctacgatctaagataaagtgcttaaggtgcctg
gggaaatctgagaggtatgagagaatgatggatcttactgttgagattgatggagatatt
gaaactttggaggaggctcttggacaatttacagcgcctgaaatattagataaagataat
aagtataattgtggcagatgtaaatcgtacgagaaagccaagaagaagttaacggtactg
gaggcaccaaatattcttacaatcgtattaaaacgatttcagtctggtaactttgagaag
ttgaataagtcagttcagttcccagaagtcctggatatgactccatacatgagtggaaga
aaggataaatctccattttacagtctttatgcagtggttgtccatttggatatcatgaat
gcttcattttcaggccattatgtttgttatgtgaagaacattcaaggagaatggttcagg
actgatgacagcagggtagaacctgtcgaattgtcaagagtcttatcagaaagcgcatac
atgcttctttatgcaaggcactctccgaaacccctgggttctgtaagtagcaatgcaacc
ttttcaactggaaagttcaagaggagaagcttggaagccattcctgctgtttctaagacg
cggtcgaattccatggctacaaatgctgattctccctccgtacagcagaagcagggacag
cactctcaccggaatgccgttgatgattcctttagcaatgaatctgtcccagaagaatgg
agattcaactatcggggaagaaatactatggtggattctgctagcgaaagctcagttttc
agctcttctgatgcaagctcttgcagtactgcaagtactaaggactcggctagtactgct
gacttttcagattacatttttggtgaagcagggtccaattggcatggccagtatggaatt
tcttccaactcggctgcatcttcttcctatgataacttgcatacagatttttcagtggac
aatgatgctgataggaggctccagcaaaactcggaagataaagcaattttgtatgctaac
aaaaacaaaaatcatagtggtagatggggaattgaccttaaaaaatttgtcactgctaag
caccatgacaaaagttctgctgtacatgtgagaagaacaagtagagatgcatcagctcaa
acattttattga
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