Medicago truncatula (barrel medic): 11405711
Help
Entry
11405711 CDS
T01716
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11405711
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
11405711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
AAA_21
Fez1
bDLD2
MC7
AAA_25
AAA_16
Motif
Other DBs
NCBI-GeneID:
11405711
NCBI-ProteinID:
XP_003599445
UniProt:
G7J0X6
LinkDB
All DBs
Position
3:11291097..11325978
Genome browser
AA seq
1052 aa
AA seq
DB search
MANSRPSKRHKINRGEDDYMPGNILEIELHNFMTFDYLKCKPGPRLNLVIGPNGSGKSSL
VCAIALGLCGEPQLLGRATSIQAFVKRGEDSGHIKITLRGDHKEEQITIMRKINTSNKSE
WVLNGNIVPKKDVAETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL
PEQHRALIDKSRALKHVELSLEKNEGTLNQLKERNAELEKDVERVRQRDELLAKAESMKK
KLPWLRYDMKQAEYREAKEREKAAAKELEKVAKLLNELKEPIKKQKEEKAALDAKCKKAN
NRISDNAKKRMELMEKENQLEVELQGKYKEMDELRKQEENRQQKLKQAREELAAAELELE
NLNPYEPPKDEIHRLREGIVELDYSANQARQNKSQAESEIKHKKFSLIKCKERLMEMNNK
STKCLHALRKSGVERIFDAYKWVQEHRDEFHKEVYGPVLVEVNVSDQSHAGYLEGQVAWY
TWKSFITQDPRDRDFLVNNLRNYDVPVLNYTGHDSRREPPPEISADMRALGINSRLDQIF
DAPVAVKEVLISQSNLDHSFIGSKETDQKADGVPKLGITSLWTPENHYHWSKSRYGNHVS
AVVEQVQRPQLLLNNLNVRDIEDLSSEERELHEHIASLEESLKKFQDEERSFVNQAANLR
KQLENIRLEAQNKQKERQAIVRRTEQKKSKLKSMEEQDDLDTELAKLVDQATKCNIQRLH
NAIKIKDLLVEAAGYRRSFAEQRMAFIEFDAKIGEAEASLKQHENIALQASSHFNNSKKE
AEECRQKLTDLLNYAKSIARLTPDLEKEFLEMPTTIEELEAAIQDTTSQANSILFVNNNI
LEQYEARQRQIEDLAKKLDADKKESTRCLAELDNIKGKWLPTLRNLVAQINETFSQNFQQ
MAVAGEVSLDEHDMDFDQFGIHIKVKFRESGQLEVLSAHHQSGGERSVSTIVYLVSLQDL
TNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILN
VMNGPWIEQPSKVWTAGDRWSIITGHVGEAVC
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattctcgcccttctaagcgccacaaaattaacaggggggaggatgattatatg
cctggaaacattttagagatcgaacttcataatttcatgacatttgattacttaaaatgt
aaacccgggcctcggttgaatctcgtaattgggccaaatggttctggaaagagttctctt
gtatgtgctattgctcttggcctctgcggagagccccagttgcttgggcgagccacaagt
attcaggcatttgtgaagcggggagaagattctgggcacattaagattaccttgaggggg
gaccataaagaggagcaaattacaattatgcgtaaaataaacactagcaacaagtcggaa
tgggttttaaatggaaatattgtgcccaaaaaggatgtggctgaaaccattcagaggttt
aacatccaagtaaataatttgactcaatttttaccgcaagacagggtctgtgagtttgca
aagttaactcctgtgcaacttctggaagagacagaaaaagctgttggtgatccacaactt
ccagagcaacatcgtgcacttattgacaaaagtcgtgcactgaagcatgttgagctgtct
ctggagaaaaatgaaggaactttaaaccagttgaaggaacgtaatgctgagttagagaag
gatgttgaacgtgttcgtcaaagagatgaacttctggccaaggccgaatcaatgaaaaag
aaattgccatggctgaggtatgatatgaagcaggctgaatatcgtgaagctaaggagcgt
gagaaggctgcagcaaaggagcttgagaaggtggcaaaattattaaatgaacttaaagaa
cctattaagaaacaaaaagaggagaaagctgcattagatgcaaaatgcaaaaaggctaac
aaccgaataagtgacaatgccaagaagagaatggaacttatggagaaagagaatcaattg
gaggtggaattacaagggaagtacaaagagatggacgagttgaggaagcaggaagaaaat
cggcaacagaaattaaaacaagctagggaggaacttgcagctgctgaacttgaacttgag
aatctaaacccttatgaacctcccaaggatgagattcatagactgagagagggaattgtg
gagttggattattctgctaaccaagcgagacagaataagtcacaagcagaaagcgaaata
aagcataaaaagttctccttaattaagtgtaaagagaggttgatggaaatgaataataaa
agtaccaagtgtttgcatgcactgcggaaatctggggttgaaagaattttcgatgcttat
aaatgggtccaagagcatcgcgatgaattccacaaggaggtttatggcccagttttagtt
gaggtgaatgtctcagatcaatctcatgctggatatctagagggtcaagttgcttggtac
acttggaagtctttcataacacaggatccccgcgatcgggacttcttggtgaacaaccta
cggaactacgatgtaccagttttaaattatactggtcatgatagccgaagagagccgcct
cctgaaatatctgccgatatgcgtgctcttggtatcaactctcgtttggaccaaattttt
gatgctcctgttgctgtcaaggaggtgttgattagccaatctaatcttgatcattcgttt
attggatcgaaagaaactgatcagaaagctgatggggtaccaaaattgggaattactagc
ttatggacaccagaaaatcactatcactggtctaagtctagatatggaaatcatgtctca
gcagttgttgaacaagtgcaacgccctcaacttctactgaataatttaaatgtgagggac
attgaggatctgagctccgaggaaagggagcttcatgaacatattgcttccttggaggaa
agtcttaaaaagtttcaagacgaggaaagaagctttgtgaatcaggctgctaatcttcgt
aagcagttggagaacattcgtttagaagcacaaaataagcaaaaagagcgacaagcaatt
gttaggcgtactgaacaaaagaaaagcaaactgaaatcgatggaggagcaagatgatttg
gatactgagttagcaaagcttgttgatcaggcaacaaagtgtaacattcaacgattacat
aatgcaattaaaattaaggatcttcttgttgaagccgcgggttacagacgaagttttgct
gaacaacgcatggctttcattgaatttgatgcaaagattggagaagcggaggccagtctg
aagcagcatgaaaatattgctctgcaggcatcatcacactttaataactctaagaaagag
gctgaagaatgtagacagaagcttacagatttattaaactatgctaagtcaattgcccgg
cttacacccgacctagagaaggagtttcttgagatgcctactacaattgaggagttggaa
gcagctatccaagatacaacttctcaagccaattcaatcctttttgtcaataataacata
ttggaacaatatgaggctcgtcagagacagatagaagatcttgcaaaaaaacttgatgct
gacaagaaggaatctacaaggtgtctagctgaattggataacattaagggaaaatggctc
cctacattgagaaacctcgtggcccagataaatgaaacttttagtcaaaattttcaacag
atggctgttgctggagaagtttcactagatgagcatgatatggactttgatcaattcgga
atacatataaaagtcaaattcagagaaagtggacagcttgaagttctcagcgcccatcat
caatctggaggggaacgatcagtttcaactattgtttatcttgtttcacttcaagatctt
acaaactgcccatttagagttgttgatgagatcaatcaaggaatggatccaataaatgaa
aggaagatgtttcagcaactagtgagagcagcaagcaagccaaatacaccacagtgtttc
ttacttaccccaaagttgttaccagatctgcaatatagtgaggcatgcagtatattgaat
gtaatgaatggtccttggattgagcaaccctcaaaggtctggaccgctggtgatcgatgg
agtattatcactggacatgttggagaggcagtttgttaa
DBGET
integrated database retrieval system
