Medicago truncatula (barrel medic): 11405916
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Entry
11405916 CDS
T01716
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
11405916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
11405916
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
11405916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
11405916
NCBI-ProteinID:
XP_039686289
LinkDB
All DBs
Position
2:complement(9194789..9201909)
Genome browser
AA seq
334 aa
AA seq
DB search
MNNRKKTADGYQRWMMKAANNGPAAFGEHWKLDDKESNAGGGRSRKKTGDDDDEGPSSDK
GEEDEDEEVDKKNRHGLNKKSGYDDDEGPRGGDLDDDDDDDYDVEKGDDWEHEEIFTDDD
EAPGNDPEEREDLDPEIPAPLEIKQDDDDDEEEDEDNDEGGGLSKPGKELKKLLGRTGGP
SESDEEDADDDDVDDEDGVPAITATKQKEPKEEPIDSSPSKPTATGPARGTPTSKGKRKE
NEEAKSSISVPTKKLKTENAPKSSGKDVNGSTSKSNGPPRGTPPQSSNAASGPVTEEEIR
AVLMQSTPLTIKELAAKFKARLKCEEDKKAFGNM
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaataataggaaaaagactgctgatggatatcaaagatggatgatgaaagcagcaaat
aatggtcctgctgcatttggtgaacattggaagttagatgacaaagaaagcaacgcaggt
ggtgggagaagccgtaaaaaaactggtgatgatgatgatgaaggtccttcctctgataaa
ggagaggaagatgaagatgaggaagtagataagaagaatagacatggactgaataaaaaa
agtggctatgatgacgatgaaggtccaaggggaggggaccttgatgatgatgatgatgat
gattatgatgttgaaaagggtgatgattgggagcatgaagagattttcactgatgatgat
gaagctcctggtaatgatcctgaggaaagggaagatttggatcctgaaatccccgctcct
cttgaaatcaagcaggatgatgatgatgatgaggaggaggatgaagataatgacgaaggg
ggaggtctgagtaaacctgggaaagagctgaagaagttgcttgggcgaactggtggtccg
agtgaatctgatgaagaggatgctgatgatgacgatgttgatgacgaggatggtgttcct
gctataactgctacaaagcagaaggaacctaaggaagaacctattgacagcagtccttca
aaacctacagcaacaggacctgctcgtggaacacctacttcaaaggggaaaagaaaagaa
aatgaggaagcaaagtcatctattagtgtaccaactaagaagttgaagacagaaaatgca
ccaaaatcatctggaaaagatgtaaatggatctacgtccaaaagtaatggacctccaaga
ggtacaccaccccagtcatcaaacgcagcttctggacctgtaactgaggaagaaattagg
gctgttctaatgcaaagcactccattaaccataaaggagcttgcagctaaatttaaggca
agattaaaatgtgaagaggataagaaagcttttggtaatatgtaa
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integrated database retrieval system
