Medicago truncatula (barrel medic): 11406169
Help
Entry
11406169 CDS
T01716
Name
(RefSeq) elongation factor 1-alpha isoform X2
KO
K14416
elongation factor 1 alpha-like protein
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
11406169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
11406169
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
11406169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
PHD
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
11406169
NCBI-ProteinID:
XP_003629885
UniProt:
G7L805
LinkDB
All DBs
Position
8:40472123..40481065
Genome browser
AA seq
704 aa
AA seq
DB search
MPRKVNYGIDYYDDDYEDYDDYDYDVEAENYGVESDTKKETIKPGVWSCSICTYDNDESM
TSCDICGVLRHPLVINGTSNTNKTDPFKFDVPSPDDVVHTGLHSSKMGLKDKVKNSKDSR
LSSSSREKNELETNTESADNLSSLMQKNKLSKNVEIDHEKFGKTSNSLSASLPKDKGNNA
NKINSSKNGTNGIQSSEEKSGSLSALPKVEESDKLSLSSNKDGKSESASSSFNHTVPDAR
SQNSDNTNAKGPHQQVSYQPEKWMLPQQSEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLG
RISKKEMHKYEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDS
PGHKDFIPNMISGATQADAAVLVIDASLGAFEAGMDGGKGQTREHAQLIRSFGVDHVIVA
VNKMDAVSYSKDRFDFIRHQLGMFLRSCGFKDSSLSWIPLSAMENQNLVASPSDAHFKNW
YTGPYLLDAVDSLQPPTREFAKPLLMPICDVIKSTAQGQVSACGKLEAGALRSGTKVLVR
PSDVVGTVRTLERDSNVCSVARAGDNVAVTLHGVDGSHVLAGGVLCHPDFPVAVAKHLEL
KLLVLDGTSPILIGAQLEFHIHHAKEPARVSRILSVLDPKTGKVTKKNPRCLTSKQSAVI
EVILHEPVCVVEFSRCKALGRVSLRSLGRTIAVGLVSRIIEEQD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtaaagtaaactatggaatcgattactacgacgatgactatgaggattatgat
gactatgattatgatgttgaagctgaaaattatggagtagaatctgatacaaagaaagag
accattaagcctggagtttggagttgctcaatttgtacctatgacaatgatgagagtatg
acttcatgtgatatttgcggcgttctacgtcatcccttggttatcaatggaacttccaac
accaacaaaacagatcctttcaagtttgacgttccatccccagatgatgtggttcatacc
ggcctacattcttcaaaaatgggtttgaaagacaaagttaaaaactctaaagattctcgg
ctttcatcaagcagcagagagaagaatgaactagaaaccaatactgaaagtgcagacaac
ttatcgtccttaatgcaaaagaacaagctttccaaaaatgtagaaattgatcacgaaaaa
tttggtaaaacttcaaacagcttatcagcctctttgccaaaggacaaaggaaacaatgcg
aataaaataaattcttcaaaaaatggtacaaatggtatccaatcaagcgaagaaaagtct
ggtagtttgtctgcactgccaaaagttgaagagagtgataaacttagtttgtcttctaac
aaagacggaaagtctgaaagtgcttccagcagttttaaccacacggttcctgatgcaaga
tctcaaaattctgataatactaatgctaagggacctcatcaacaagtttcttaccagcca
gaaaagtggatgcttcctcaacaatctgaagatacgttgactcagttgaatctcgcaatt
gttggtcatgttgattctggaaaatcaacactatctggtaggttattacacctattggga
cgaatttccaagaaagaaatgcacaaatatgaaaaggaggccaagttacagggcaaagga
tcctttgcttatgcttgggcacttgatgaaagttctgaagaaagggaaaggggaataacc
atgacagtggctgtggcatattttgacactaagaaatatcacgttgttgtgcttgactct
cctggtcataaagattttatcccaaacatgatttctggagctacacaagctgatgctgca
gttcttgttatagatgcgtcacttggtgcatttgaagctggtatggatggtggcaaagga
caaacaagagagcatgcacaacttattagaagtttcggtgtagaccatgttatagttgca
gtaaataagatggatgctgtgtcatactccaaagaccgatttgattttataagacatcag
ctgggaatgtttctccgctcatgtgggttcaaagattcttcactctcatggattcccttg
agtgccatggaaaatcaaaatttggtagcatccccttctgatgctcatttcaaaaactgg
tatactggaccttatctgttagatgcagttgactcactacaacctcctactagagaattc
gcaaaacctctgctaatgccaatatgtgatgttatcaaatcaactgcacaaggacaggtg
tctgcttgtgggaaactggaagcaggagctcttcgaagtggaacaaaggtgttagttagg
ccttcagatgttgttggaacagtacgtacattggagcgtgactctaacgtctgctctgtt
gcaagagctggagataatgtagctgtaaccttgcatggtgttgacggaagtcatgtattg
gctggaggcgtattatgccatcctgactttcctgttgcagttgcaaagcatttggagttg
aaattgcttgtcttggatggtacaagtcccatattgatcggcgctcagttagagtttcac
atacatcatgcaaaagagcctgctagagtttcaagaatattgtcagtacttgatcccaag
actggtaaggtgaccaaaaagaaccctcgttgtctcacgtcaaaacaaagtgcagtaatt
gaggtgattttgcatgagccagtctgtgtggtagagttttctagatgtaaagctcttgga
agagtatcccttagatctttaggaagaacaattgctgttggacttgtgtcaagaataatc
gaagaacaagattag
DBGET
integrated database retrieval system
