Medicago truncatula (barrel medic): 11406646
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Entry
11406646 CDS
T01716
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00900
Terpenoid backbone biosynthesis
mtr01100
Metabolic pathways
mtr01110
Biosynthesis of secondary metabolites
Module
mtr_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
11406646
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mtr01006
]
11406646
Enzymes [BR:
mtr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
11406646
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
11406646
2.5.1.29 geranylgeranyl diphosphate synthase
11406646
Prenyltransferases [BR:
mtr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
11406646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
11406646
NCBI-ProteinID:
XP_003629488
UniProt:
D6Q1T5
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All DBs
Position
8:35747983..35749706
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AA seq
372 aa
AA seq
DB search
MSAVNLNTWTHSNFMCNQVTTTATTRSRSRIPSFYFTKIPISVSPIKPSKPNSSSFSFSV
SSLLTKQEPIEAEEQNPIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGG
KRVRPVLCLAACELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV
FGEDVAVLAGDALLAFAFEHIAVSTVDVSPARIVRAIGELAKSIGSEGLVAGQVVDINSE
GLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDI
LDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAEKLNRDAQEQLSGFDLNKSAPL
IALANYIAYRQN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgtgaatcttaacacatggacacactccaatttcatgtgcaatcaagttact
actactgctacaactagatccagatccagaatcccatctttctattttaccaaaataccc
atttcagtttcacccattaaaccatcaaaacccaattcttcttcattttctttctctgtt
tcttcattacttacaaaacaagaaccaatagaagcagaagagcaaaacccaatcttcaat
ttcaaatcctacatgatagaaaaagcaactagggttaacaaagccttagacgacgccgtt
tcattacgcgaaccgttaaaagttcatgaagccatgcgttactctcttctcgccggcgga
aaacgcgttcggccggttctctgtttagccgcctgtgaactcgtcggaggaaccgaaccg
atggcgatgccagccgcctgcgccgttgaaatgatccacacgatgtctctcatccacgat
gaccttccttgtatggataacgatgatctccggcgaggtaaacctacaaaccacaaagtc
ttcggagaagacgttgctgttctcgccggagatgctcttctcgcttttgctttcgaacat
attgccgtctccaccgttgatgtttctccggcgcgaattgtccgtgcaatcggtgaatta
gcgaaatcaataggctcggaaggactcgttgcgggacaagttgttgatataaactcagaa
ggtttatccgatgtcggactcgaacggcttgaattcattcatttgcataaaactgcagct
ttgttagaaggtgctgttgttcttggtgcaatattaggtggtggaagtgatgaagatgtt
gaaaaactgcgaaaattcgcgacatatattggtttattgtttcaggttgttgatgatatt
cttgatgtgacgaaatcttcacaagagttagggaaaactgctgggaaagatttggtagct
gataaggttacttatcctaagcttttagggattgagaaatcgaaagagtttgctgagaaa
ttgaaccgtgatgcacaagaacaactttctgggtttgatttgaataaatctgctcctttg
attgctttggctaattacattgcttataggcaaaactag
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