Medicago truncatula (barrel medic): 11406730 Help Entry 11406730          CDS       T01716                                  Name (RefSeq) vacuolar sorting protein 39-like   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism mtr  Medicago truncatula (barrel medic) Pathway mtr04142   Lysosome biogenesis mtr04145   Phagocytosis mtr04148   Efferocytosis Brite KEGG Orthology (KO) [BR:mtr00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     11406730    04142 Lysosome biogenesis     11406730    04148 Efferocytosis     11406730  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mtr04131]     11406730 Membrane trafficking [BR:mtr04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     11406730 SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H TPR_Vps41 zf-HC5HC2H_2 DUF4428 AlaDh_PNT_N Motif Other DBs NCBI-GeneID:  11406730 NCBI-ProteinID:  XP_039684632 LinkDB All DBs Position 8:complement(35512576..35520178) Genome browser AA seq 992 aa AA seqDB search MVHTAYDSFELLTNSTSKIESIESYGSKLLLGCSNGSLLVYAPEHSVPAPEEMRKEAYVL ERNVNGFAKKAVVSLQVVESREFLLSLSESIAFHKLPTFETIAVITKAKGANAFCWDEHR GFLCFARQKRVCIFRRDGGRGFVEVKDFGVLDVVKSMSWCGENICLGIRKAYVILNATSG SISEVFTSGRLAPPLVVSLPSGELLLGKDNIGVIVDQNGKLRPEGRICWSEAPTEVVIQN PYALALLPRFVEIRSLRGPYPLIQTIVFRNVRHLRQSNNSVIIALENSIHCLFPVPLGAQ IVQLTAAGNFEEALSLCKLLPPEDSNLRAAKEDSIHIRYAHYLFDNGSYEESMEHFLASQ VDITYVLSLYTSIILPKTTIVHDSDKLDIFGDPLHLSRGSSMSDDMEPSSASNMSELDDN AELESKKMSHNMLMALIKFLHKKRHSIIEKATAEGTEEVVFDAVGNNFESYNSNRFKKIN KRHGSIPVSSEAREMASILDTALLQAMLLTGQPSMAENLLRVLNYCDLKICEEILQEGSY HVSLVELYKCNSMHREALEIINKSVKESESSQSKIAHRFKPEAIIEYLKPLCELDTTLVL EYSMLVLESCPTQTIELFLSGNIPADMVNLYLKQHAPNLQATYLELVLSMNEGAVSGTLQ NEMVHLYLSEVLDWHADLSSEQKWDEKVYSPKRKKLLSALESISGYNPEALLKLLPSDAL YEERAILLGKMNQHELALSLYVHKLHVPELALSYCDHVYESAHKSSVKSLSNIYLMLLQI YLNPRRTTKNYEKKISNLLSPRNKSIRKVTSKSLSRTMSRGSKKIAAIEIAEDAKASQSS DSGRSDADTEEFTEEECTSIMLDEALDLLSRRWDRINGAQALKLLPKETKLQNLLPILGP LVRKSSEMYRNCSVVRSLRQSENLQVKDELYNKRKAVIKISDDNMCSLCHKKIGTSVFAV YPNGKTLVHFVCFRDSQSMKAVAKVSPLKKAF NT seq 2979 nt NT seq  +upstreamnt  +downstreamnt atggtgcacactgcttatgattccttcgagcttctcacaaactcaacctccaaaatcgaa tccatcgaatcctacggttccaaactcctcttaggatgctccaacggatctctcctcgtt tatgcgccagagcattcagtaccggctccggaggaaatgcggaaggaagcgtatgtgtta gagagaaacgtaaatggattcgcaaagaaggctgtggtgtcattgcaggtggtggaatcg agagagtttcttctttcgttatcggaatccatcgcgtttcataaacttcctaccttcgaa actattgcggttattactaaagcgaaaggtgcaaatgctttttgttgggatgaacataga ggcttcttgtgttttgcgaggcagaagcgtgtttgtatcttcagacgcgacggtggtaga ggatttgttgaggtgaaagactttggtgttcttgatgtggtgaagtcaatgagttggtgt ggtgagaatatatgtttggggattagaaaagcgtacgtgattctgaatgctacgagtggt tcaatatctgaagtttttacttctgggaggctagcaccacctttggtggtatctcttcct tccggagagctccttttgggcaaggacaacattggcgtcattgtggatcaaaacggaaaa cttcgtccagaaggtaggatttgttggtcagaggccccaacagaagttgtaattcagaat ccatatgctttagcccttctgccaagatttgtggagattcgatctcttcgaggcccatat ccattgatacaaacaattgtttttcgaaatgtacgtcatcttcgccagagcaataattca gtgattattgccttagaaaattctattcactgcctctttcctgttcctcttggagcccag attgtccaattaacagctgctggtaacttcgaagaagctttgtcattgtgcaagctcctt ccacctgaagattcaaatcttcgtgctgcaaaggaggattcaattcatataaggtatgcc cactatctttttgacaatggaagctatgaggagtcaatggaacatttcctagcatctcaa gtagatataacctatgttctttctctgtatacatccattatccttccaaagacaactatt gttcatgattcagacaagttggacatttttggggatcctttgcatctttccagaggttcg tctatgtctgatgatatggagccctcttcagcatctaatatgtcagaattggatgacaat gcagaacttgaatcgaaaaaaatgagccataatatgctaatggctctcatcaaatttttg cacaagaagagacatagtattattgagaaggccactgcagaaggaaccgaggaagtagtt tttgatgcagttggtaataactttgaatcctataacagtaataggtttaagaaaataaac aagaggcatgggagtatacctgttagctcagaagctcgggagatggcttcaatattggat actgctctactccaagcaatgcttctaactggacaaccttctatggctgaaaatttattg agagttcttaactactgtgatctgaaaatatgtgaagagatacttcaagaaggaagttat catgtttctttagtagaactttacaagtgcaactccatgcaccgtgaagcccttgaaatt attaataaatcggtgaaagagtcagagtctagccagtccaagattgctcatagattcaag ccagaggccatcatcgagtacctcaagccactttgcgaactagacacaacacttgttcta gagtactccatgcttgttcttgaaagctgcccaacccaaactattgagctctttttgtct ggaaatattccagcagatatggtgaacttatatttgaagcaacatgctccaaatttgcaa gccacatacttggagctcgtgctttcaatgaatgagggtgccgtatctggaactttgcaa aatgaaatggtacatctctatctttctgaagtacttgattggcacgctgatttaagttct gaacagaaatgggacgagaaagtttactcccctaaaaggaaaaaattactgtctgcctta gagagtatatcaggatataatccagaagctcttttgaaacttcttccatcagatgcttta tacgaagagcgggccatattgttgggaaaaatgaaccaacatgaactagcattatctttg tatgttcataagcttcatgttccagaactggcattgtcttattgtgatcatgtgtatgaa tctgcccataagtcttctgtaaaatctctcagcaatatatacctaatgcttctgcaaatc tatctgaatccacggaggacgaccaagaactacgaaaagaaaatttcaaatctattatct cctcggaataaatccattcgaaaagtaacttcaaaatcattatcaagaactatgagccga ggatcaaagaaaattgctgcaatagagattgcagaggatgcaaaagctagtcagagtagc gacagtggtaggagtgatgctgacacagaagaatttactgaggaagaatgtacttctatc atgcttgatgaagccctcgatttgttaagccgcaggtgggatagaatcaatggagcccag gcccttaaactcctaccaaaagagaccaaactacagaacttgcttccaattcttgggccc cttgtgagaaaatctagtgaaatgtatcgtaattgttcagttgtcagaagcttgagacag agcgagaaccttcaggtgaaagacgaactatacaataagaggaaagcagttataaagatt agcgatgataacatgtgttccttgtgccataagaaaatagggactagtgtttttgcagtt tatccgaatgggaaaactctagtgcattttgtgtgcttcagagattctcaaagtatgaaa gctgtggccaaagtgtctccactgaaaaaggcattttga

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