Medicago truncatula (barrel medic): 11407105
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Entry
11407105 CDS
T01716
Name
(RefSeq) long chain base biosynthesis protein 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00600
Sphingolipid metabolism
mtr01100
Metabolic pathways
Module
mtr_M00094
Ceramide biosynthesis
mtr_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
11407105
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mtr01007
]
11407105
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
11407105
Amino acid related enzymes [BR:
mtr01007
]
Aminotransferase (transaminase)
Class II
11407105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
11407105
NCBI-ProteinID:
XP_003615764
UniProt:
G7K743
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Position
5:complement(31925953..31933139)
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AA seq
480 aa
AA seq
DB search
MMASAAVNFVNTTLNWVTYALDAPSARAIVFGYNFGGHLFIEVFLLVVILFLLSQKSYKP
PKRPLTNKEIDELCDEWVPQSLIPSLDKDMHYEPPVLESAAGPHTIVNGKEVINFASANY
LGLIGHQKLLDSCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGL
STMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLEETLEKLTSKY
KHTKNLRRYIVVEALYQNSGQIAPLDDIIKLKEKYRFRILLDESNSFGVLGSSGRGLTEH
YGVPVEKLDLITAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITA
IDVLDENPNILTKLKNNIAVLWKGLLEIPGFTIVSHPESPIVYLRIKKSTGSLNDDLRLL
ENIAERVLKEDSVFVATSRRSTLDKCRLPVGIRLFVSAGHSESDVHKASESLKRVAALVL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttcagctgctgttaatttcgtgaacactacattaaattgggttacatatgct
ttagatgcaccttctgcaagagctatagtttttggatataattttggtggacatttattt
attgaagtttttctcttggtggtcatacttttcttgctttctcagaaaagttacaagcct
cctaaaagacccttgacaaacaaggaaattgacgagttatgtgatgaatgggttccacaa
tcgcttattccttctcttgataaagatatgcactatgaaccaccagtgctggagagtgct
gctggcccacataccatagttaatggtaaagaagttatcaattttgcttcagcaaactat
cttgggcttataggtcatcaaaagttacttgactcatgcacttctgctttagagaaatat
ggtgttggttcatgtggcccccgtggattttatggaacaattgatgtacatcttgactgt
gaagcaagaatagcaaaatttttaggaacgcctgattcaattctatactcttatggactt
tccaccatgttcagtgctattcctgctttttctaaaaaaggagatataattgtggcggat
gaaggagtccactggggaatacagaatggcctttatctttctagaagcactgtcgtgtat
tttaagcacaatgacatggattctttagaagaaactttagagaagcttacttctaagtat
aagcacaccaagaatttgaggcgttatattgttgtcgaagctctctaccagaattctggt
caaatagcacccttagatgatatcattaaattgaaggaaaaatatcggtttcgtatttta
ctggatgagagcaactcatttggtgtgcttggaagttctggaagaggtctcactgaacac
tacggagttccagttgagaagttagatcttataactgctgctatgggacatgcattggcc
acagaaggaggattctgcaccggaagtgcaagagttatagatcaccagcgattgagcagc
tctggctacgtcttttctgcttctttgcctccatatcttgcaagcgctgcaattacagct
attgatgtccttgacgaaaatcccaatatattaacaaagttgaagaacaacattgctgtg
ttatggaaagggttgttggaaataccaggcttcacgattgtgagtcatccagagtcacca
attgtttatttgagaataaagaagtcaacgggttctttgaatgatgacctacgcctgctt
gaaaatattgccgaacgtgttttgaaagaagattctgtatttgtggcgacttctcgaaga
tcaacattagacaagtgccgtttgcctgtaggaataagattgtttgtttctgcagggcat
tcagagtccgatgttcacaaggcatctgaatcattgaaaagggttgctgcattagttttg
tag
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