Medicago truncatula (barrel medic): 11407549
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Entry
11407549 CDS
T01716
Name
(RefSeq) putative disease resistance protein RGA3
KO
K19613
leucine-rich repeat protein SHOC2
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_R13L1-DRL21
LRR_14
NB-ARC
LRR_RPS2
LRR_8
WH_DRP
LRR_13
LRR_Zer-1
LRR_4
LRR_1
AAA_16
Rx_N
nSTAND3
LRR_6
RuvB_N
AAA
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
11407549
NCBI-ProteinID:
XP_003612744
UniProt:
G7KAX4
LinkDB
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Position
5:complement(11941613..11951684)
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AA seq
1173 aa
AA seq
DB search
MVAYSISSILQLISTLKPIPTRLSGIDHINKLEDILKEINDKVQKLSYSSIGEVRLLPLL
QKVRDVVIDLNDLMEVLRYNESTTSGSTTAFIAFGLKITNHFKVKKAAEEFKRLIEVDLK
GLCLSISQEAAEAATETVNSNMKNVKRNFEKITMVGRENEKKEIIDQLLKLNNPADDFVP
VIVIVGVPGIGKTKLASLVCEDEQVKAHFGFEPIWIRSLHETFDVEYIANLAMTTVIDGS
VRRLLVLDDLRIEIKHDLEKLQKKLTESGGTSWAILITTRSNYVADNISVARYVLKGLNR
HESQLLFQQIRGQTSTSTNNKQDNIEWELVKDCGGVPLAIVTVAMLMKNQSAGGVSILAA
DQIAEVERKFLQELKFMYYKDLPMLHKLCFAYCSLFPRDYLIDAERLIELWTAEGFLTIP
QQQFCRPCFNDFVPLVFQQVEEKEEGVVSNHSYRMNRLMHKLARLVTCEENMTVNSMGDK
VKGGMLRASFDFALDLSCGIPDLLFDKAKKLRTILLPYSTNNPRLPHEVKMTTSTCDKIF
NTFKSLRVLDLHDLGIKMVPTSIEEVKYLRYLDLSHNNIEKLPSSITKLIHLQTLKLSQC
HILKELPKDLDGLSCLNHLDIEGCLDLTHMPSGINKLTSLQTLSLFVASKKQVITGGLRE
LTDLNNLRGRLEISHLEQVMFSPSKEAAQDEFLKNKQHLEFLTLRWDHDDEEEEEEEKVS
HVKDIDRKLLDCLEPHPNLRALFIVGYNRHTLSNWLHSIQCLVKFTLNDCPKCEFLPPMD
QLPHLKVLQIRRLDSLKFIAENNQVGNSPSSTTPILFFPSLKELTISDCPNLKSWWENEI
WGNDRPYFSCISKLNIQCCPKLACMPLYPGLDDELVLVESNVRSMRDTMHHADGSETTTK
SKPFSKLKSMVIERIEQTPPERWLKNFVSLEELHIRDCVILKSLPQGFKSLSSLISLTIE
RCEELDLDISGTEWKGLRKLRSLTLRSIPKLKSLPREIENLNSLHDLRLYDCHGLTDLTE
SIGNLTSLGKLVISECRNLDYLPKGMEMLQSLNTLIIMDCPLLLPRCQPDTGDDWPQIAH
IKNKLVKKTPQDLRDDIEEEVCVVGDGKQDEGGWGAGATGATVVVVKEHGCAISGSVLQR
EKTEDERPHKGVFGGMEQKGVAVVAGGWWRPMS
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggttgcctattccatctcaagcatcctacaactcattagcaccctaaaacctatacct
actcgtttatcaggaatagatcacatcaacaagcttgaagatattctcaaagaaatcaat
gacaaagtccagaaactgagctactcctccataggtgaagtacgtcttcttcctttgctg
caaaaggttagagacgtggtcatcgatttaaatgacttgatggaggttctccgttacaac
gaaagtactactagtggctcaacaacagcgttcattgcattcggcctaaaaataaccaat
catttcaaagtcaagaaagccgcggaggagttcaaacgcttgatcgaggtggatttaaag
ggattgtgtttgtcaatatctcaagaagcagcagaagcagcaacagaaacagttaatagt
aacatgaagaatgtcaaaagaaattttgagaaaattaccatggttggcagagaaaatgaa
aagaaggagattatagatcaactactgaagttgaacaaccctgctgatgatttcgttcct
gttattgtcattgttggtgttcctggaattgggaaaacaaaacttgcaagtcttgtttgc
gaagatgaacaagtcaaagctcattttggtttcgaaccaatttggatccgttctctccat
gaaacctttgatgtggaatacattgctaacttagctatgaccacagtcattgatggaagt
gtacgccgcctacttgtgctcgatgatttgcgaattgagattaagcatgatcttgaaaag
ttgcaaaagaaattaactgaatctggcggtaccagttgggcaatactcatcactacacgt
agcaactatgtcgccgataatatttctgttgccaggtatgttttgaaagggcttaacaga
catgaatctcaattgttattccaacaaattcgtgggcaaacttcaacctcaaccaacaac
aaacaagacaacatcgaatgggaactcgtgaaggattgtggtggagtccctcttgcgatt
gtgaccgtagcaatgttgatgaagaaccaaagtgctggtggtgtttcaattttggcagca
gaccaaatagcagaagtggagaggaagtttctacaagagctcaagtttatgtattacaag
gatcttccaatgcttcacaagttatgttttgcatattgttcattgtttccaagagattat
ttgattgatgctgagagattaattgaactctggactgctgaaggatttctcaccattcca
caacaacaattttgtcgaccttgtttcaatgactttgttccgttggttttccaacaagtg
gaagaaaaagaagaaggtgttgtaagtaatcactcatatagaatgaatcggttaatgcat
aaactcgcaaggctagtcacctgtgaagaaaacatgactgtgaattcgatgggggataaa
gttaaaggtggaatgttgcgagcttcatttgattttgctttggatctgtcatgtgggatc
ccagacttgttgttcgataaagcaaagaaactgagaaccattcttttgccgtacagcact
aacaaccctcgccttccacacgaggtgaagatgacaacatcaacatgcgataagatcttc
aacaccttcaagtccctacgtgtgctggatctacatgacttggggattaagatggttcca
acatctattgaggaggtgaagtacttgaggtatctagatctttctcataacaacatagaa
aagctacctagttccatcactaagcttatccacttgcaaacattgaaattatcacaatgt
cacatcctcaaggaattgccaaaagacttggatggcctgagttgcctcaaccatcttgac
attgagggatgcctggatctaactcacatgccaagtggtataaataagctcacttcttta
caaacattgtcactctttgtggccagcaagaaacaagtaatcactggaggactaagagaa
ctcacggatcttaacaatctgagaggccggttggaaatatcgcatctagaacaagtcatg
ttctctccatctaaggaagctgctcaagatgaatttctgaaaaataaacaacaccttgag
tttttgactctaagatgggatcatgatgacgaggaagaggaggaggaggagaaggtaagc
catgtcaaagatatagaccgaaagttgcttgattgtcttgagccacatccgaatttgaga
gcgctattcattgtggggtacaatcgtcacaccttgtctaactggctccattccatccag
tgtcttgttaagtttaccttgaacgactgtcccaaatgcgagtttctccccccaatggat
cagcttccacatctcaaggttctccaaattcggagactggactctctgaaattcattgca
gaaaacaatcaagttggtaattccccttcctctactaccccaatattgttttttccatcc
ttgaaggaacttacaatttcggattgtcctaatctgaaaagttggtgggaaaatgagatt
tggggtaatgatagaccatatttcagttgcatttcaaaactaaacatccaatgttgtcct
aaattagcttgcatgcctctatatcctggtcttgatgatgagcttgttcttgtggagtcg
aacgtaagatcaatgagggatacaatgcatcatgctgatggtagtgaaactactactaag
tcaaaacccttttccaaattgaaatcaatggtaattgagcgtattgagcaaactccacca
gagaggtggcttaaaaactttgtttcgcttgaggaacttcacattagagattgtgttatt
ttaaagtctttaccacaaggtttcaagtctttgagttcactcatatcactcactattgag
agatgtgaagaacttgatctcgacatctccggaactgaatggaagggtctgagaaagctt
cgttctcttacattaaggagtattcccaaactcaagtcccttccaagggaaattgaaaac
ttgaactctttgcatgatttaaggctttatgattgccatggtctaactgacctaacagaa
agcataggtaacctcacttcccttggcaaactagttatttctgaatgcagaaatttagat
tatctgcccaaggggatggaaatgctacagtctctaaatactttgattattatggattgc
cctttgttattgccaaggtgtcaacccgacacaggtgatgattggccacaaattgctcat
atcaagaataaactggtgaagaaaactcctcaagacttaagggatgacatagaagaagag
gtttgtgtcgtcggagatgggaaacaagacgaaggaggatggggcgcaggtgcgacggga
gcaacagtggtagtggtgaaggagcatggatgtgcaatcagtgggtctgtgttgcagaga
gagaagacagaagatgaaaggccacacaagggtgtatttgggggtatggaacaaaagggt
gtggcggtggtggccggtgggtggtggaggccgatgagttag
DBGET
integrated database retrieval system
